3VKG


Conserved Protein Domain Family
Dynein_C

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pfam18199: Dynein_C (this model, PSSM-Id:408026 is obsolete and has been replaced by 465677)
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Dynein heavy chain C-terminal domain
This family represents the C-terminal domain of dynein heavy chain. This domain is a complex structure comprising six alpha-helices and an incomplete six-stranded antiparallel beta-barrel. The shape of this domain is distinctively flat, spreading over the AAA1, AAA5 and AAA6 domain.
Statistics
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PSSM-Id: 408026
Aligned: 402 rows
Threshold Bit Score: 73.785
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3VKG_A       2935 SNKARKMINDLQKmq------sSEEdgEDdqvsgsskkesssssSedkgkaKLRAtITEWTK----------------LL 2992 Dictyostelium...
XP_002954528 4031 QVNSNRVISQLKMmslhadaagGFNr-----------------aQwqvqlgPLLRlWDQLMAgagalkavmkeihtrgTS 4093 Volvox carter...
EEN67527      448 RIISAQVIGQLKVlmrseaaaeKFDr-----------------eTwstelsPILNlWKKLNQasqll-------qqriAA 503  Florida lancelet
XP_005038274 4007 RIISSQVISQLRIlsrsvtagcKFDr-----------------eVwstelsPVLNlWKKLNQnsnli-------hqkvSP 4062 Collared flyc...
XP_007665027 4000 RMISSLVISQLRTlgrsvtagcKFDr-----------------eIwsnelsPILSlWKKLNQnsnli-------hqkvTP 4055 platypus
XP_015197180 4017 HIISSQVISQLRIlsrsitagsKFDr-----------------eIwsnelsPILNlWKKLNQgssli-------hqkvAP 4072 spotted gar
XP_022527179 3981 RITSTQVISQLRIls------rSVA--AGskfdre---vwssglS------PVLNlWKRLNQ----------------GS 4027 Mexican tetra
XP_026693267 3218 RVNSQRVISQLKIlmrtveagaKFDrea--------------wqSel---gPILQlWKKLNQgtssv------ihtkiEV 3274 vase tunicate
XP_025753905 4000 RIVSSQVISQLRIlsrsvaagsKFDr-----------------eLwsnglsPILNlWKKLNQgstli-------hqkvDP 4055 Nile tilapia
NP_001125878 4008 RMISSQVISQLRIlgrsitagsKFDr-----------------eIwsnelsPVLNlWKKLNQnsnli-------hqkvPP 4063 Sumatran oran...
3VKG_A       2993 PkplkqlkrttqnIK-----------DPLFRCFEREISTGGKLVKKITNDLANLLELISGNIKSTNYLRSLTTSISKGIV 3061 Dictyostelium...
XP_002954528 4094 Dcg----------------------gSPVENFMALERFKGASLVALIDRTLGAIARVLKGTDTLSSGVQLNGTALLSDTI 4151 Volvox carter...
EEN67527      504 Psdq--------------------adKPIISFIQLERFSSVKLVQNVHQSLAALSRVIRGTSLLTSDVQTLAKSLLRQET 563  Florida lancelet
XP_005038274 4063 Paeq--------------------qgSPILSFITLEQFNAIRLVQSVHQSLASLSKVIRGTSLLSSEVQRLASALLNQKC 4122 Collared flyc...
XP_007665027 4056 Pnek--------------------qgSPILSFIVLEQFSAIRLVQSVHQSLAALSKVIRGTTLLSSEVQSLASALLNQKC 4115 platypus
XP_015197180 4073 Pses--------------------qaSPVLSFIILEQFNAIRLVQSIHQSLAALSKVIRGTSLLTSEVQKLATALLNQEC 4132 spotted gar
XP_022527179 4028 Sl-----------IQqkvsppaeavgSPVLSFVQLEQFNAIRLVQSIHQSLASLSKVIRGTCLLTADVHKLATALLNQEC 4096 Mexican tetra
XP_026693267 3275 Ptvs--------------------daSPVVQFVMLERYNAIKLVQKVHQTLSSLSKVMRGSQLLTSDVHKLASSILQQET 3334 vase tunicate
XP_025753905 4056 Ptes--------------------qkSPVLSFISLEQFNAIRMVQSIHQSLAALSKVIRGTQLLTPEVQKLATALLNQEC 4115 Nile tilapia
NP_001125878 4064 Pndr--------------------qgSPILSFIILEQFNAIRLVQSVHQSLAALSKVIRGTTLLSSEVQKLASALLNQKC 4123 Sumatran oran...
3VKG_A       3062 PKEW-KWy-SVPETISLSVWISDFSKRMQQLSEISesSdys-----------siqVWLGGLLNPEAYITATRQSASQLNG 3128 Dictyostelium...
XP_002954528 4152 PGAW-DAawE-GPEAP-MDYCRTVVAKALAIEGHWqrCqqpgggglldgssgagpLELSSVFHPGTFLNALRQQSARALG 4228 Volvox carter...
EEN67527      564 PGGW-QSmwE-GPEDP-MQYLRALVARAMAIQGWAerAeagtl--------lrdvLDLSELFHPDTFLNALRQQTARDLR 632  Florida lancelet
XP_005038274 4123 PVTW-QSkwE-GPEDP-LQYLRSLVARALAIQNWVekAekeel--------lsdtLDLSELFHPDTFLNALRQETARVMR 4191 Collared flyc...
XP_007665027 4116 PLTW-QSkwE-GPEDP-LQYLRGLIARAIAIQSWVdkAekqvl--------lsdtLDLSELFHPDTFLNALRQETARAMS 4184 platypus
XP_015197180 4133 PQSW-QSkwE-GPEDP-MQYLRAVVARALAIQSWVekAgrqsl--------lsdaLDLSELFHPDTFLNALRQETARLMG 4201 spotted gar
XP_022527179 4097 PLSWqSK---WEGPEDPMQYLRAVVARALAVQSWVdrVekntl--------rsdtLDLSELFHPDTFLNALRQETARAMG 4165 Mexican tetra
XP_026693267 3335 PMQW-HSmwE-GPDDP-MQYLHSLVAKTMALQGWVekAekgtl-------lgsneLNLADLFHPNTFLNAVRQQTARETH 3404 vase tunicate
XP_025753905 4116 PLTW-QNkwE-GPEEP-MQYLRAVVTRALAIQSWVerAnrqal--------lsdiLDLSELFHPDTFLNALRQETARTMS 4184 Nile tilapia
NP_001125878 4124 PLTW-QSkwE-GPEDP-LQYLRGLVARALAIQNWVdkAekqal--------lsetLDLSELFHPDTFLNALRQETARAVG 4192 Sumatran oran...
3VKG_A       3129 WSLENLRLHASSLGkis---segGaSFnVKGMALEGAVWnnDQLTpT-DI---LSTPISIATLTWkDkddpiFnns--ss 3199 Dictyostelium...
XP_002954528 4229 CSMDTLKLVTSWDAarlhstasaApVVlLGGIILQGATFdgSRLS-PvTAeapAFRAIPPMYLLWlPkd-apYays---s 4303 Volvox carter...
EEN67527      633 CPMDSLKFVSSWKGsisga----klavkIGGLMLEGCSFngSRLS-EnQRdspSVCIVPNFTVAWiDsk-gaDpype-ee 705  Florida lancelet
XP_005038274 4192 CSVDSLKFTASWKGriqeg----klqvkISGLQLEGCRFdgNRLS-EnLHdspSVSSVLPCYMAWiPqd-ayGpysp-ee 4264 Collared flyc...
XP_007665027 4185 CSIDGLKFVASWKGrlqak-----lqvkISGLQLEGCSFdgNQLS-EnQHdspSVSSMLPCYMAWiPqd-ayGpysp-ee 4256 platypus
XP_015197180 4202 CSMDSLKFVASWKSritea----klqvkIDGLKLEGCSFdgNRLS-EnQHdspSVSPVPPCYMAWiPqs-asGcysp-ee 4274 spotted gar
XP_022527179 4166 CSMDSLKFVASWKGqitg--sklQ-VK-VGGLQVEGCTFdgNRLS-EnQHdspSVCAVPACYMAW-Ipq-svPgcyseee 4238 Mexican tetra
XP_026693267 3405 ISMDELKFACSWKGtisga----kfnvkIGGLQLEGCSFdgLTLS-EnQRdssTVSAVPACYVAWlPkd-apVpyss-ne 3477 vase tunicate
XP_025753905 4185 CSMDSLVFVSSWRSpiaqa----klqvkIGGLQLEGCSFdgVHLC-EnQHdspSVSAVPTCYMAWvPqnsvaAstaa-ee 4258 Nile tilapia
NP_001125878 4193 RSVDSLKFVASWKGrlqea----klqikISGFLLEGCSFdgNQLS-EnELdspSVSSVLPCFMGWiPqd-acGpysp-de 4265 Sumatran oran...
3VKG_A       3200 kLSVPVYLNETRSELLFSIDL-----PYdqstskqNWYQRSVSISS 3240 Dictyostelium discoideum
XP_002954528 4304 yMEAPLYMTSERTKLLARVQL-----PLngpdeqdIWVLAGLALFL 4344 Volvox carteri f. nagariensis
EEN67527      706 vIQLPLYFSADRDRIVNQVKV-----PCggn--qdQWVQCGAALFL 744  Florida lancelet
XP_005038274 4265 cISLPVYTSVERGRVVTNIDV-----PCggn--qdQWIQCGAALFL 4303 Collared flycatcher
XP_007665027 4257 cISLPVYTSAEREQVVTNIDV-----PCggh--pdQWIQCGAALFL 4295 platypus
XP_015197180 4275 cISLPLYTSAERTRVVTNIDV-----PCggn--sdQWIQCGAALFL 4313 spotted gar
XP_022527179 4239 cVWLPVYTSAERVRVVTNVQLpcggnPD-------QWIQSGAALFL 4277 Mexican tetra
XP_026693267 3478 tISLPIYKSPNRESIVTCLDV-----PCggq--tkTWIQSGAALLL 3516 vase tunicate
XP_025753905 4259 sICLPLYTSSERVKVVTHISL-----PCgan--pnQWIQCGAALFL 4297 Nile tilapia
NP_001125878 4266 cISLPVYTSAERDRVVTNIDV-----PCggn--qdQWIQCGAALFL 4304 Sumatran orangutan
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