7C76


Conserved Protein Domain Family
Tlr3_TMD

?
pfam17968: Tlr3_TMD (this model, PSSM-Id:407816 is obsolete and has been replaced by 465595)
Toll-like receptor 3 trans-membrane domain
Toll-like receptor (TLR) 3 is an endosomal TLR that mediates immune responses against viral infections upon activation by its ligand double-stranded RNA, a replication intermediate of most viruses. TLR3 is expressed widely in the body and activates both the innate and adaptive immune systems. This entry represents the Toll-like receptor 3 trans-membrane domain which has been shown to form dimers and trimers with different surfaces for helix-helix interaction.
Statistics
?
PSSM-Id: 407816
Aligned: 18 rows
Threshold Bit Score: 41.1255
Created: 28-Apr-2021
Updated: 29-Sep-2021
Structure
?
Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
7C76_A       698 DSAPFELFFMINTSILLIFIFIVLLIHFEGWRI 730 
XP_023361585 711 DSAPFKILFMINTSFLFILIFVVMLVHFQGWRI 743  Tasmanian devil
XP_006630171 694 DQAPFKPMFVTTSSFLLTFMAMALLIHFQGWRI 726  spotted gar
XP_016080961 551 DSAPFDMFFMVSASALFLFTSGVLLARFQGWRL 583  platypus
XP_003221650 684 DSAPFLLFFTVSISILLIFISVVLLIHFQGWRI 716  green anole
KFO35134     213 DSAPFELFFVVSTSLLFTFIFIVFLIRFEGWRI 245  Damara mole-rat
AAT37633     698 DMTPFKALYILSSTAVLMLLFISFLVHFQGWRI 730  zebrafish
CAF96592     700 DSTPFQALFVLSSASVILLLVVALFVRFQGWRI 732  spotted green pufferfish
XP_004066063 711 DKTPFQALYMLSSTAVLIMMVSALLVRFQGWRI 743  Japanese medaka
KPP66446     775 DTTPFQALYVFTSTTVLIVMATALVFHFQGWRI 807  Asian bonytongue
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap