Conserved Protein Domain Family
zf-C2H2_assoc3
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pfam16637: zf-C2H2_assoc3 (this model, PSSM-Id:406930 is obsolete and has been replaced by 465210)
Putative zinc-finger between two C2H2 zinc-fingers on Patz
zf-C2H2_assoc3 is a partially unstructured region on Patz or POZ-, AT hook-, and zinc finger-containing proteins of higher eukaryotes. It lies between the two C2H2-type zinc-fingers towards the C-terminus of these proteins and may well be an unusual zinc-finger itself.
Links
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Statistics
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PSSM-Id: 406930
Aligned: 8 rows
Threshold Bit Score: 101.513
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
Download Cn3D
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
XP_003448462 485 GTHNYCG--ICNKD----GQENAGKCPHLESEESDPSFGDLSNSEELKSPHKTDgpelempslpCNGAS-AGALVSPEAS 557 Nile tilapia
XP_014344903 511 GAAFHSDrtCGVKD----GMSDGEKCPHQEQHDNSDSFGEFSDTSDLHSPTKQN----------ENGPF-SCDPVVNPKS 575 coelacanth
ELK18690      72 GPSNFCS--ICNRE----GQ----KCSHQDPIESSDSYGDLSDASDLKTPEKQS----------TNGSF-SCDMAVP-KN 129 black flying fox
XP_001232642 539 GAAFHCVrtYGIKE----GQ----KCSHSDPIESSDSYGDLSDTSDLKTPEKQS----------TNGSF-SCDMAVS-KN 598 chicken
XP_004910654 494 AALFHCVrtCGVKE----GD----KC-HHGEQESSDSYGDLSESSDLKSTEKQN----------ANGSYtACDLVIP--K 552 tropical clawed...
XP_031143370 533 GTPYHMGrqCSVED----GQENTGKCPHLESEESDPSFGELSNGDELKSPHKPDrpelempslaCNGAS-AGALGSPEGS 607 pike-perch
XP_011612194 529 H--------MGRQClvedGQENTGKCPHLESEESDPSFGELSNGEDLKSPQKPDgpelemqqlaCNGAP-GAPLGSPEGS 599 torafugu
TWW62040     477 GTHNYCG--ICNKD----GQENTGKCPHLESEESDPSFGELSNGEDLKSPQKPDgpelemqqlaCNGAP-GAPLGSPEGS 549 sansaifugu

XP_003448462 558 KAKMDPEKK 566 Nile tilapia
XP_014344903 576 DRDLEAERK 584 coelacanth
ELK18690     130 KMESDGEKK 138 black flying fox
XP_001232642 599 KMETEAEKK 607 chicken
XP_004910654 553 KTEAESEKR 561 tropical clawed frog
XP_031143370 608 KAKTDPEKK 616 pike-perch
XP_011612194 600 KPKTDPEKK 608 torafugu
TWW62040     550 KPKTDPEKK 558 sansaifugu
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