Conserved Protein Domain Family
HnRNPA1
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pfam11627: HnRNPA1 (this model, PSSM-Id:402981 is obsolete and has been replaced by 463312)
Nuclear factor hnRNPA1
This family of proteins represents hnRNPA1, a nuclear factor that binds to Pol II transcripts. The family of hnRNP proteins are involved in numerous RNA-related activities.
Links
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Statistics
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PSSM-Id: 402981
Aligned: 23 rows
Threshold Bit Score: 27.3393
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
ELK15338      145 GGSGSYNDFGN-YN-NQSSDFGPMKG---ENFRG-RSSG-PYSGG 182 black flying fox
XP_010585512  256 GGG-SYNDFGN-YN-QQPSNYGPMKS---GNFGGsRNMGgPYggg 294 African savanna elephant
12_pfamImport   1 GEG-NYNAFGN-YN-QDPSNYGPVKN---GNFGEsRHMVaPYGGG 39 
5_pfamImport    1 ESG--YNDLGS-YN-QQPSNYSPVKS---GNFSGrRKMErPYGKG 38 
7_pfamImport    1 GGGGNYNDFEN-YSgQPQSNYGPLKG---GSSGG-RSSGsPYGGG 40 
NP_956398     360 GGGGNYNDFGN-YN-SQQSNYGPMKG---NFGGGgRNSG-PYGGG 398 zebrafish
13_pfamImport   1 GGDGNLNDFGN-YGgQQQSNYGPMKG---GSFGG-RISViPYGGD 40 
XP_005995111  253 GYGNGYNNFGS-YD-QHQSSFGPMKG---GGYSGrNNSG-PYRGG 291 coelacanth
XP_017553953  254 GGGNGYSDFGSgYG-QQSSGYGPMKGg--NTYGG-RSGA-PYPRG 293 red-bellied piranha
NP_988923     250 GNG--YNSFGS-YS-QHQSSYGPMKGagsGSWNRpNTSG-PYRGG 289 tropical clawed frog
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