3ETO,4ZLP,2OO4


Conserved Protein Domain Family
NODP
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pfam07684: NODP (this model, PSSM-Id:400155 is obsolete and has been replaced by 462229)
NOTCH protein
NOTCH signalling plays a fundamental role during a great number of developmental processes in multicellular animals. NOD and NODP represent a region present in many NOTCH proteins and NOTCH homologs in multiple species such as NOTCH2 and NOTCH3, LIN12, SC1 and TAN1. The role of the NOD and NODP domains remains to be elucidated.
Links
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Statistics
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PSSM-Id: 400155
Aligned: 37 rows
Threshold Bit Score: 50.3368
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
3ETO_A         183 SIVYLEIDNRQC---------VQA--S-SQC-FQSATDVAAFLGALASLGSL--NIPYKIEAVQSETVEPP 238  human
NP_001037825  1626 SKAHLLVNSQKC---------KQT--S-SEC-IDTTDNAASVISARASTGTL--EAEFPINTVASTTNPTP 1681 vase tunicate
XP_001376558  1370 FVVVLGVDSSRC---------GSTppA-QQC-PWDPGFMLRFLAAMAAIGALetLLPGPLLVAHPQESSAP 1429 gray short-tailed opo...
10_pfamImport    4 VIAFLEIDNRRC---------TTS--PgAEC-FSTASEAAGYLAATAQAHGL---TSFPIYKVEGVTSPEP 59  
EFN60549       142 VIIYLEIDNRKCipssmmsglTTSrrDaTGC-FPSANEAAEYLAATASKHTL--LRNFPIEQVRGVVDPQg 209  Florida carpenter ant
EFX69806       243 VIVFIEIDNRKC---------SQI--LgGEC-FARASQVAQFLAASASDHSL--DADFPIHRVLALDAGPS 299  common water flea
CAP27055       754 VVLYLEVE-EIC---------QPK----STCrFSTAQSVVNLIAAGLIKSNGrqSLGFSITEAMVAAPRRH 810  Caenorhabditis briggsae
P13508         700 IVLYLEVE-EIC---------KPE-----FCrFSTAQSVVDLIAAGLVKSDGrmSLGLPITEAMVAVPKRN 755  Caenorhabditis elegans
7_pfamImport     4 VVVYLEVQ-EDC---------IPG-----KClYTDSQSVVDIISARLAKQGTi-TFGAPISEAIVAAPRRP 58  
XP_002403554  1550 TLVHLEIDNRRC---------LKS--QgSEC-FQSAAKAAEFLAAAQARHSL--ETPFHIQEVQGAGREQG 1606 black-legged tick
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