1JGN


Conserved Protein Domain Family
PAM2
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pfam07145: PAM2 (this model, PSSM-Id:399847 is obsolete and has been replaced by 429316)
Ataxin-2 C-terminal region
The PABP-interacting motif PAM2 has been identified in various eukaryotic proteins as an important binding site for pfam00658. It has been found in a wide range of eukaryotic proteins. Strikingly, this motif appears to occur solely outside of globular domains.
Links
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Statistics
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PSSM-Id: 399847
Aligned: 39 rows
Threshold Bit Score: 24.7698
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
1JGN_B    3 KSNLNPNAKEFVPGVK 18  
Q29A33  893 KHVLNPSAKPFTPRAG 908  Drosophila pseudoobscura pseudoobscura
Q4TDG3   60 KSTLNPNANEFKPRFN 75   spotted green pufferfish
O70305  882 KSTLNPNAKEFNPRSF 897  house mouse
Q17HU8  130 QSTLNPLAAEFVPSVL 145  yellow fever mosquito
Q7RZ42   26 PKTLNPLAPEFVPKVQ 41   Neurospora crassa
Q6DFV5 1097 TYVLNPLAPEFIPRAL 1112 house mouse
Q5CXC8  103 STYLNPNAQEFIPRGW 118  Cryptosporidium parvum
Q29FZ5  182 TSRLNPSAKPFAPRGY 197  Drosophila pseudoobscura
Q2HD11  925 TSQLNPSAASFTPRSA 940  Chaetomium globosum CBS 148.51
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