6IDX


Conserved Protein Domain Family
ELMO_CED12

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pfam04727: ELMO_CED12 (this model, PSSM-Id:398415 is obsolete and has been replaced by 461411)
ELMO/CED-12 family
This family represents a conserved domain which is found in a number of eukaryotic proteins including CED-12, ELMO I and ELMO II. ELMO1 is a component of signalling pathways that regulate phagocytosis and cell migration and is the mammalian orthologue of the C. elegans gene, ced-12. CED-12 is required for the engulfment of dying cells and cell migration. In mammalian cells, ELMO1 interacts with Dock180 as part of the CrkII/Dock180/Rac pathway responsible for phagocytosis and cell migration. ELMO1 is ubiquitously expressed, although its expression is highest in the spleen, an organ rich in immune cells. ELMO1 has a PH domain and a polyproline sequence motif at its C-terminus which are not present in this alignment.
Statistics
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PSSM-Id: 398415
Aligned: 209 rows
Threshold Bit Score: 99.9723
Created: 20-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6IDX_A        299 NLLEERMMTKMDPNDQ-AQRDIIFELRRIAFDAESDPS-------------NapgsgtekrkamYTKDYKMLGFTNHi-- 362 
XP_002139678   82 KSLQNKCAIPVNPINP-IHEQLLRDYWALSYPDNPEIN-------------S------------ISSYWKLLGFSGE--- 132  Cryptosporidi...
EFA75573      212 HKIANIKTGKLIIDKQ-SIDHLVTRLLKVSFPNKTFDEptsss----ngntS------------TEQKMKILGFQSGatt 274  Heterostelium...
EGC37607      221 NGIKVAKQTSVLQDTH-NVLSFISRLCKMSFPPEDEKNql----------iP------------FEEKMKLLGFESN--- 274  Dictyostelium...
Q55GR7        262 NGIKASKQTSIFLDRQ-NVLSFLNRLCKMSFPNNGGDSp-----------tT------------NEEKMKLLGFETD--- 314  Dictyostelium...
Q54WH5        475 KELHMQRLHPINVDKVlSHQILLSDLWGSALSSYPFGG-------------I------------NSEHWLLLGFRSS--- 526  Dictyostelium...
XP_004354254  419 KELYQQRNQLIDTTKI-NIQTMLSDLWNATLSTYPFR--------------I------------KSHRWLLLGFRGT--- 468  Cavenderia fa...
CAZ85669      223 VLLRRWRDVKVDLEAK-EHRIALKGLHLASA-PERSDPgtdpkadspakkkH------------NPEKWRRLGFGTE--- 285  Perigord truffle
Q5CY83         81 HYIRNKCLISLNCADP-NHEQLFQDYWALAYPDYPEIN-------------R------------ISSNWRLLGFQND--- 131  Cryptosporidi...
KAE8904116    207 aklvGAMKAPLHPANH-EHVEMLQRLWTSCFDTQPFA--------------T------------TSAEWNRLGFRHG--- 256  Phytophthora ...
6IDX_A        363 -N-PAMDFTqtPPGMLALDNMLYLAKVHQDTYIRIVLENSSREDk----------------------------------- 405 
XP_002139678  133 -N-PHNDFI--FGGLVALQHMVYFAEHYRGIFRKILEESQRYPSnglssntlnmkktistlsssffcsqntsslttpcnr 208  Cryptosporidi...
EFA75573      275 gSiSNTELL--GTGILGLRNLIYFGARYSRIYLEILNVQMKRDQee---------------------------------- 318  Heterostelium...
EGC37607      275 -D-LQNELQ--NTGILGVRNMIYFCARYSRIYREILQSQIDKIDskng-------------------------------- 318  Dictyostelium...
Q55GR7        315 -D-LHLELQ--STGLLGIRNMIYFCARYFRIYDEILKAQIKKFKeininnnnnsnnndennnnnnnnnnnnnn------- 383  Dictyostelium...
Q54WH5        527 -N-PMEDFK--NTGVLALRNLSYFSKQHLQPFQSLLLTQTKREKddndnnnnkvidkpiitnkfnietldddnd------ 596  Dictyostelium...
XP_004354254  469 -N-PIDDFR--VTGLLALRNLSYFAKHHTSTLQYLLMTQTRRETlsnalesksttttemdetnsss-------------- 530  Cavenderia fa...
CAZ85669      286 -S-PAWEFR--EVGFLGMMDLTDFVRKDEDGFRKVLLEQNAKEMe----------------------------------- 326  Perigord truffle
Q5CY83        132 -D-PRFDFK--CAELLTLENLVYFAENYRNIFKVILKESQRFSSsekikyshqhsiqrsiinshkingmmspfetphnfq 207  Cryptosporidi...
KAE8904116    257 -D-PMREMQ----FLLPLQCLVFFHEVHRTVALPILNDQSGPE------------------------------------- 293  Phytophthora ...
6IDX_A        406 -----------------------------------------------------------------hECPFGRSAIELTKM 420 
XP_002139678  209 tpksygnkiwssspsllstpkhieteemcksniqsyplvlpkisesasshsnaieceeietreipvSYPLSIALISISIM 288  Cryptosporidi...
EFA75573      319 -----------------------------------------------------------------aIYSFINVAMCLTNC 333  Heterostelium...
EGC37607      319 --------------------------------------------------------------gpesFYSFSRVGFTLTNL 336  Dictyostelium...
Q55GR7        384 -------------------------------------nnnnnnnnnnnsdnvennnnnnveneddsYYSFSRVGFTLTNL 426  Dictyostelium...
Q54WH5        597 ------------------------------------nnnnqelnnnnnnnnnnnyniktkprsnsrSYPLATVAISLTYT 640  Dictyostelium...
XP_004354254  531 --------------------------------------------espcvtprantgggddteeqpkSYPFATIGISITHT 566  Cavenderia fa...
CAZ85669      327 -----------------------------------------------------------------yRCPVARASITVTSI 341  Perigord truffle
Q5CY83        208 psssnlsii------------ttpinmkdskkefgsnfepllpkvtelrstiseisnssqidqmnfSYPLSTALINVSIM 275  Cryptosporidi...
KAE8904116    294 ------------------------------------------------------------------AYSYAMVGSQIAYV 307  Phytophthora ...
6IDX_A        421 L-------------------------CEILQVGELPNEgrndyh----------------------pmffthDRAFEELF 453 
XP_002139678  289 VclylrllpctykipglankvapskvLRNFSKLYTDCS----------------------------------KNILAELF 334  Cryptosporidi...
EFA75573      334 I-------------------------YEI---YIDDENlyev--------------------------ifdqDDWFEEMF 359  Heterostelium...
EGC37607      337 I-------------------------YELYIE---DENlyei--------------------------ifdqDDWFEELF 362  Dictyostelium...
Q55GR7        427 I-------------------------FELYIE---DENlyei--------------------------ifdqDDWFEELF 452  Dictyostelium...
Q54WH5        641 L-------------------------SNIFRIGRINDSpidssiw---------------------diafsgSNWFDEIF 674  Dictyostelium...
XP_004354254  567 L-------------------------SSLFKIPSGLSKssshedslqssvvtpqqqqqsnvdqplwdisissNKWFDECY 621  Cavenderia fa...
CAZ85669      342 L-------------------------YHQFRVDKSEIDdiktyqvlesr-------------tnyerafrplLLQWSRLH 383  Perigord truffle
Q5CY83        276 IclylnfipsiykipgvpnvsasrkaMKNFMRLTNEFS----------------------------------FNTISELF 321  Cryptosporidi...
KAE8904116    308 L-------------------------SDLlqlrdggclgs----------------------erpfwrlfedPMAFFELY 340  Phytophthora ...
6IDX_A        454 GICIQLLNKTWKEm-----RA-TAEDFNKVM 478 
XP_002139678  335 SVCAIRMHSEWVDiikylgPQiAVREFDKAl 365  Cryptosporidium muris RN66
EFA75573      360 SISFELFDEIWEKe-----AK-VPEDFVTIL 384  Heterostelium album PN500
EGC37607      363 CISFELFDEIWER------ESrCVEDYITVL 387  Dictyostelium purpureum
Q55GR7        453 CISFELFDEIWERe-----GT-CQEDYIPVL 477  Dictyostelium discoideum
Q54WH5        675 VTTFNLFESLWHS------EAhSYSDFPQVI 699  Dictyostelium discoideum
XP_004354254  622 VYTLFLFESLWNS------KAyIYSDFPQIM 646  Cavenderia fasciculata
CAZ85669      384 TGALLAFIRLWREt-----GA-SLEDYEKVT 408  Perigord truffle
Q5CY83        322 SVCAIRFHAEWLDivkflgHKvAISEFDKVL 352  Cryptosporidium parvum
KAE8904116    341 CISFRAFDASWKLn-----ST-NSSDISFhl 365  Phytophthora fragariae
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