6I8B,6I8B


Conserved Protein Domain Family
Spin-Ssty
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pfam02513: Spin-Ssty (this model, PSSM-Id:396871 is obsolete and has been replaced by 460577)
Spin/Ssty Family
Spindlin (Spin) is a novel maternal transcript present in the unfertilized egg and early embryo. The Y-linked spermiogenesis -specific transcript (Ssty) is also expressed during gametogenesis and forms part of this Pfam family. Members of this family contain three copies of this 50 residue repeat. The repeat is predicted to contain four beta strands.
Links
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Statistics
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PSSM-Id: 396871
Aligned: 34 rows
Threshold Bit Score: 61.9101
Created: 20-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
6I8B_B         7 VGCRIQHGWKEGNGPVTQWKGTVLDQVPVNPSLYLIKYDGFDCVYGLEL 55 
XP_003803040 119 IGKAVGHVFESEHGTKDEWKGMVLARAPVMDTWFYITYEKDPVLYMYTL 167 small-eared galago
EGV99224     109 VGKAVEHKFEGKNGCKDEWKGMVLAQVPIMKTWYYITYKKDPVLYIYQL 157 Chinese hamster
6I8B_B        86 IGKAVEHMFETEDGSKDEWRGMVLARAPVMNTWFYITYEKDPVLYMYQL 134
XP_017457969  94 VGRAVEHKFEGKHGSKDNWRGVVLAQVPIMKDWFYITYEKDPVLYIYQL 142 Norway rat
NP_001096622 100 VGRAVQHKFEGKDGSEVNWRGVVLAQVPIMKDLFYITYKKDPALYAYQL 148 house mouse
XP_008771979 104 VGRAVEHKFEGKHGSKDIWRGVVLAQVPIMKDSFYITYEKDPLLYIYQL 152 Norway rat
AAZ14820      14 IGKAVEHMFETEDGSKDEWRGMVLARAPIMNTWFYITYEKDPVLYMYQL 62  turkey
XP_026124719 183 LGRPVVHLFETDEGSKDEWRGLVLSRAPSMPAWFFITYEKDPMLYMYQL 231 goldfish
XP_007254110 131 VGQTVEHQFEKDDGSKDPWRGLVLGRAPMMPTWFFITYEKDPVLYLYQL 179 Mexican tetra
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