5FWS


Conserved Protein Domain Family
WSC

?
pfam01822: WSC (this model, PSSM-Id:396406 is obsolete and has been replaced by 460348)
Click on image for an interactive view with Cn3D
WSC domain
This domain may be involved in carbohydrate binding.
Statistics
?
PSSM-Id: 396406
Aligned: 105 rows
Threshold Bit Score: 50.5587
Created: 20-May-2020
Updated: 7-Aug-2020
Structure
?
Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
5FWS_A        131 LGCYKDHg------------nPPPLTGT-SKTSNKLTIQTCISFCR----SQR-FKFAGMESGy---ACFCGNNPDYWKY 189  human
XP_011679367  262 LGCLVDTka-----------sRDLFTETsPIPPKDSTIKSCRISCS----MIA-SAYAVIGKN----QCNCVDDIVTLDH 321  purple sea ur...
XP_001592273   65 FGCFEDGvrg---------kpLASPLLN-LTGAPAETIQSCVNACSisgqDGIpYTYAGIEPG----SCWCSNYIFILAV 130  Sclerotinia s...
EDK40893       25 AKCSSSN----------------VAGGS-GTYYQFNSNGKCHDTCE----GFG-YTVAIVQ-Gf---YCWCANEAPGSTV 78   Meyerozyma gu...
XP_011395259   49 HGCYNDSgtlklfttrmntqqMMNFGNG-LEKDLGVSSGLCFQWCK----DNK-TTVAAMSQGd---QCWCGTEYPPESA 119  Neurospora cr...
Q5KEF3        380 IACLHDV--------------SSLSGGT-SYADQSITVESCTSSCL----KSG-YNFAGTGQVgtywTCVCGTSISSNAY 439  Cryptococcus ...
AAM22956      109 IACLPDNss----------gaVALVAFS-AAHEGPLTPEACGAFCF----AAG-NGLGAFSDQg---WCLCGAAQPPNTS 169  dog
P98161        181 VACLPDNss----------gtVAAVSFS-AAHEGLLQPEACSAFCF----STG-QGLAALSEQg---WCLCGAAQPSSAS 241  human
Q5KNE4        385 iACLHDI--------------TSVSGGV-SYIDHSLTVSSCQSHCL----IAG-YQYAATGQQgtlwHCVCGTAISDTAT 444  Cryptococcus ...
XP_001802267   49 IGCFETG----------------TPLEN-HGDYNFRSPGNCQLVCL----QEN-KNVMGLSDGv---NCWCGDQIPPKDS 103  Parastagonosp...
5FWS_A        190 GEAASTeCNSVCFGDH---TQPCGG 211  human
XP_011679367  322 TR---K-CGQVCHGYR---SLPCGs 339  purple sea urchin
XP_001592273  131 RSSPF--CLSSCPSTS---GKYCGG 150  Sclerotinia sclerotiorum 1980 UF-70
EDK40893       79 SSSK---CDTSCPGYP---AEMCAG 97   Meyerozyma guilliermondii ATCC 6260
XP_011395259  120 QTDIQN-CDITCSGYN---LEYCGG 140  Neurospora crassa OR74A
Q5KEF3        440 VEPGM--CTSACPGNS---SEACGG 459  Cryptococcus neoformans
AAM22956      170 SA-----CLPFCSGAPlalAPACGG 189  dog
P98161        242 FA-----CLSLCSGPPpppAPTCRG 261  human
Q5KNE4        445 VETGM--CLTACPGDS---SQLCGG 464  Cryptococcus neoformans
XP_001802267  104 QTKNET-CSTTCSGDD---TSLCGG 124  Parastagonospora nodorum SN15
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap