Conserved Protein Domain Family
Bbox2_TRIM10-like

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cd19765: Bbox2_TRIM10-like 
B-box-type 2 zinc finger found in tripartite motif-containing proteins, TRIM10, TRIM15, TRIM26, TRIM31 and similar proteins
This family includes TRIM10, TRIM15, TRIM26 and TRIM31. TRIM10, also known as B30-RING finger protein (RFB30), RING finger protein 9 (RNF9), or hematopoietic RING finger 1 (HERF1), is a novel hematopoiesis-specific RING finger protein required for terminal differentiation of erythroid cells. TRIM15, also termed RING finger protein 93 (RNF93), or zinc finger protein 178 (ZNF178), or zinc finger protein B7 (ZNFB7), is a focal adhesion protein that regulates focal adhesion disassembly. It localizes to focal contacts in a myosin-II-independent manner by an interaction between its coiled-coil domain and the LD2 motif of paxillin. TRIM15 can also associate with coronin 1B, cortactin, filamin binding LIM protein1, and vasodilator-stimulated phosphoprotein, which are involved in actin cytoskeleton dynamics. As an additional component of the integrin adhesome, it regulates focal adhesion turnover and cell migration. TRIM26, also known as acid finger protein (AFP), RING finger protein 95 (RNF95), or zinc finger protein 173 (ZNF173), is an E3 ubiquitin-protein ligase that negatively regulates interferon-beta production and antiviral response through polyubiquitination and degradation of nuclear transcription factor IRF3. It functions as an important regulator for RNA virus-triggered innate immune response by bridging TBK1 to NEMO (NF-kappaB essential modulator, also known as IKKgamma) and mediating TBK1 activation. It also acts as a novel tumor suppressor of hepatocellular carcinoma by regulating cancer cell proliferation, colony forming ability, migration, and invasion. TRIM31 is an E3 ubiquitin-protein ligase that primarily localizes to the cytoplasm, but is also associated with the mitochondria. It can negatively regulate cell proliferation and may be a potential biomarker of gastric cancer as it is overexpressed from the early stage of gastric carcinogenesis. TRIM31 is downregulated in non-small cell lung cancer and serves as a potential tumor suppressor. It interacts with p52 (Shc) and inhibits Src-induced anchorage-independent growth. TRIM10, TRIM15 and TRIM26 belong to the C-IV subclass of TRIM (tripartite motif) family of proteins that are defined by their N-terminal RBCC (RING, Bbox, and coiled coil) domains, including three consecutive zinc-binding domains, a RING finger, Bbox2, and a coiled coil region, as well as a B30.2/SPRY (SplA and ryanodine receptor) domain positioned C-terminal to the RBCC domain. TRIM31 belongs to the C-V subclass of TRIM family of proteins. The type 2 B-box (Bbox2) zinc finger is characterized by a CHC3H2 zinc-binding consensus motif.
Statistics
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PSSM-Id: 380823
Aligned: 7 rows
Threshold Bit Score: 79.0495
Created: 16-Oct-2018
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Zn binding site
Feature 1: Zn binding site [ion binding site], 8 residue positions
Conserved feature residue pattern:C H C D C C H HClick to see conserved feature residue pattern help
Evidence:
  • Comment:Based on the structure evidence that Homo sapiens Midline-1 (2JUN) binds two Zn2+ ions through its B-box motif.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1          #  #       #  #    #  #     #  #     
Q12899       100 KLCERHREKLHYYCEDDGKLLCVMCRESREHRPHTAVLM 138 human
Q9C019        81 TYCEEHGEKIYFFCENDAEFLCVFCREGPTHQAHTVGFL 119 human
XP_007483537 105 QLCKKHGEKTFFYCEADEQFLCFVCRELREHSTHIVLPV 143 gray short-tailed opossum
Q9UDY6        97 DVCQEHGEKIYFFCEDDEMQLCVVCREAGEHATHTMRFL 135 human
XP_007662069  62 LESKEHREKIYFFCEDDGKFLCVFCREGQEHRTHRVDLL 100 platypus
XP_001520258  96 TLCGKHGEKLHFHCEDDGQLLCIVCRESREHRPHEVTVI 134 platypus
Q9BZY9        93 ATCPRHQEMFHYFCEDDGKFLCFVCRESKDHKSHNVSLI 131 human

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