Conserved Protein Domain Family
APC_u5
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pfam16630: APC_u5 (this model, PSSM-Id:374687 is obsolete and has been replaced by 406923)
Unstructured region on APC between 1st and 2nd catenin-bdg motifs
APC_u5 is a short region of natively unstructured sequence lying between the first and the second 15-residue beta-catenin binding motifs, APC_15aa, pfam05972, on APC or adenomatous polyposis coli proteins in higher eukaryotes. The function is not known.
Links
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Statistics
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PSSM-Id: 374687
Aligned: 9 rows
Threshold Bit Score: 148.9
Created: 25-Apr-2019
Updated: 18-Jul-2019
Structure
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Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
XP_015193197 1045 LNSGRQSPSQNERWARPKHLVEDEMKRNDQKSVRSQNQAYQMYTEStsdSEEKHMKYQSRFVQPECPGGFrRSSNS---S 1121 spotted gar
P25054       1036 LNSGRQSPSQNERWARPKHIIEDEIKQSEQRQSRNQSTTYPVYTES---TDDKHLKFQPHFGQQECVSPY-RSRGAn-gS 1110 human
XP_004949340 1039 LNSGRQSPSQNERWARPKHIIDDEMKQNDQRQSRSQSATYPVYTES---GDDKHMKYQSPFGQQDCVPSF-RSRGSn-gS 1113 chicken
XP_017213427 1004 LNSGRQSPSQNERWARPK-LLDDEMKRPDQKPPRSQSPGYPMYTEGsseGEDKPKKYQPRFVQQDL-PAF-RSRGS---N 1077 zebrafish
XP_016279217 1001 LNSGRQSPSQNDRWARPKHVIEDEIKQNEQRQARGQNTPFSAYSES---TDDKHMKFQSRFGQQECVSPY-RSRGAs-gS 1075 gray short-ta...
XP_008112221 1035 LNSGRQSPSQNERWARPKHIIEEEIKQSEQRQSRSQSGAYPVYTEG---GDNKHLSYPSAFGQPECVSPF-RSRDSs-tS 1109 green anole
XP_014351222  746 LNSGRQSPSQNERWGRPKHIIDDEMKRNEQKATRSQ-TGYSVYESSc-gNDEKHMKFQPRFGQSDCVSPY-RPRGPn-sS 821  coelacanth
XP_017945374 1036 LNSGRQSPSQNERWARPKHIIDSEMKQSEQRQPRTTKTTYSSYTEN---KEEKHKKFPPHFNQPENAPAYaRSRGTnnqA 1112 tropical claw...
XP_022536604 1013 LNSGRQSPSQNERWARPK-TLEEEIKRSEQKPPRSQSPGYPMYPEGnteSEDKRKKFQPRFVQQDMSGGF-RQRGP---N 1087 Mexican tetra

XP_015193197 1122 EQSRGSSSHGMNKKISQPMCPVDDY 1146 spotted gar
P25054       1111 ETNRVGSNHGINQNVSQSLCQEDDY 1135 human
XP_004949340 1114 DQNRVGSTLGINQKVNQSLCQVDDY 1138 chicken
XP_017213427 1078 EQISSGSSHGLNKKISQTICSVDDY 1102 zebrafish
XP_016279217 1076 EQNRVSSGHGINQKVNQSLCHEDDY 1100 gray short-tailed opossum
XP_008112221 1110 EQNRTGCSHGINQKVNQSLRQVDDY 1134 green anole
XP_014351222  822 EQSRA----GINQKMNQSLCQVddy 842  coelacanth
XP_017945374 1113 DQSRVGSNLSNNSKASKPHCQVDDY 1137 tropical clawed frog
XP_022536604 1088 EQSSSGSSHGMTKKISQTICTVDDF 1112 Mexican tetra
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