Conserved Protein Domain Family
BBS1

?
pfam14779: BBS1 (this model, PSSM-Id:373290 is obsolete and has been replaced by 464312)
Ciliary BBSome complex subunit 1
The BBSome (so-named after the association with Bardet-Biedl syndrome) is a complex of 8 subunits that lies at the base of the flagellar microtubule structure. The precise function of the all the individual components in cilia formation is unclear, however they function to promote loading of cargo to the ciliary axoneme. The primary cilium, a slim microtubule-based organelle that projects from the surface of vertebrate cells has crucial roles in vertebrate development and human genetic diseases. Cilia are required for the response to developmental signals, and evidence is accumulating that the primary cilium is specialized for Hedgehog (Hh) signal transduction. Formation of cilia, in turn, is regulated by other signalling pathways, possibly including the planar cell polarity pathway. The connections between cilia and developmental signalling have begun to clarify the basis of human diseases associated with ciliary dysfunction. BBS1 predominantly localizes to the basal body and or transitional zone of ciliated cells. It has been found in a heptameric complex with BBS2, BBS5, BBS7, BBS8, and BBS9, termed the BBSome. Mutations in BBS1 can lead to retinal inadequacy.
Statistics
?
PSSM-Id: 373290
Aligned: 43 rows
Threshold Bit Score: 224.385
Created: 29-Apr-2019
Updated: 18-Jul-2019
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
ESO04536      15 WIDGFYDPTTRIQTMSQCMVLSDIYKDDDFKLVLADFGdffssnpavvnnigaldgrkndkVKLKVFKGLAMINEVCIND 94  Helobdella robusta
EAX92947      10 WTIAFSDKTTGIAAVPQCLSSGDIFGDGNCRILIATLD-----------------------QKLICFDGARMTHNITIPD 66  Trichomonas vag...
Q22BU8        15 WLNGYRDPVAKINAFNNNMDLIPLTRDGENRLIVGDFAt----------------------NKILGYKGINVEFQIEVNE 72  Tetrahymena the...
Q3SE77         6 WIQGWSDLVANLKVTQNCMDLIDVQGNGQYNLVVADQN-----------------------QRLVSYRNTNIAWETRLTD 62  Paramecium tetr...
EEH51790      49 WLDAWNDPMAGAPAYSPCVTSADLAGDGEWRLVVATAD-----------------------KKLKTWNGTTLASEHTLLE 105 Micromonas pusi...
EGD72418      49 WQKVVDDPIADMDCTSSCITFADVNNQGENKVIVANMQfae------------------gkSKLQVLNCGELQQSIHLFG 110 Salpingoeca ros...
XP_016843623  11 WLDAIWEPNTRMYTLPNGIDMLDVTGDGDARLIIADLGsst-----------------lddTKLRVFKGADQATEHAMTD 73  jewel wasp
EFN86690      19 WLEALWEPSAGLFALPGGLDMLDVSGDGDARFICADLGpvg-----------------sdsTKVRVYKGGDQVTEHNMVD 81  Jerdon's jumpin...
XP_016660355  26 WIDVDINPPINLQTYNCCMMLSDVHGDNDNKFVVVDFGsgt------------------ssPQLKIFKGLKQTHVIYLNE 87  pea aphid
XP_012338781  18 WLEALWEPAAKLYTLPNGLDMLDVSGDGDARLVCADLGald-----------------insPKIRVYKGGDQITEHNMVD 80  little honeybee
ESO04536      95 IPSSIVTIA-VDT----LVPSIPALAISSSCYVYIYKNMKPYFRFTLPCSPL-CPEEEKAWRDYQ-NEH-IKLSELVVAL 166 Helobdella robusta
EAX92947      67 MPSSICVHYnTSS------SSLPLVAVGAGNNILFFLNLRQFSKFTLP-LPFkSPEEEAIYQHIQaQTEgYTLEQAQLEL 139 Trichomonas vag...
Q22BU8        73 QIIAVSSFYpEQS----QFSGIPCLCFAVDGYIFIYQNNQPRYKFPLPKIEI-HPKELEVWQQFQeGSK-EVQLKMIDQW 146 Tetrahymena the...
Q3SE77        63 KPVCMTYFY-GDT------SGQPCISICHGNTIYNYKIFKAFYKCQIPNIQL-KQEEADIWKQYStDKN---LQNLIRDL 131 Paramecium tetr...
EEH51790     106 VPVGIAAFY-AEDhnnpASMKAPSLAVAAGCYVYIYRNLRPFYKFTVPNQTV-DAAETVTWERLR-DGA-IAPVEAFETL 181 Micromonas pusi...
EGD72418     111 FPCGTISFRtSDE------ASAPAIAVASGNALYVFKNLKPFYKFILPDLPL-DEQELETWVGVRrAER-VDADVLQNAL 182 Salpingoeca ros...
XP_016843623  74 VPCSVVGFY-TEN----GEKKSAALAIGAGSSVFIYKNMRPHFKFCLPQLSA-HPREQDIWYKAGlDEE-LNILSLADDL 146 jewel wasp
EFN86690      82 PPCGIVGFY-TEN----GEPRSSVVAVGAGASVYVFKNMRPFFKYCLPHIDA-HPKEREIWHKCGlDEE-LNVLTLADDL 154 Jerdon's jumpin...
XP_016660355  88 KPSAITTVY-TDN----SEQHIPCVAVVIKNEIYFYRNCKPYHKYSIQSTTIrDTEECKLWQ-----ES-EDAFDLLKRL 156 pea aphid
XP_012338781  81 LPCGVVGFY-TQN----GESRSSVVAVGVGSSVYIFKNMRPYFKYCLPHIEV-HPKEREIWHKAGlDEE-LNVLTLADEL 153 little honeybee
ESO04536     167 DNIRGFgrLNEMTQKSVKFLQLSTNEE------RLNFIDQYKEVPLVKNTAI---TIMTSLMKNVHDDDgdggaggGIRC 237 Helobdella robusta
EAX92947     140 TQLKDR--NVSLSTTSLSFIAADLKQTmvmnryKELFS------DITSLDCI---TAMASIKNNALEDD-------KSTR 201 Trichomonas vag...
Q22BU8       147 NKLRNEq-NISLSSKALDVLIQTKAIK------QQELIKQFLSGGIDMLNLVdtpTCLTKINTYQEGDS-------AISQ 212 Tetrahymena the...
Q3SE77       132 KNLQQQ--HSNLSYKSLELLCFQDLQK------QQELAEKYQDSPYIEDSV----TCVSVLKKNVDEDK-------SQGQ 192 Paramecium tetr...
EEH51790     182 SELRDQ--GAKLTSRSLDLLAIEEGEDvq--arRDAFAYGNAPEPLTQQTSV---TCVGTIKKRSDDAA-------SPDC 247 Micromonas pusi...
EGD72418     183 LTLRGN--GVKLSPRSLKFLSLPPEM-------REDFVNMVKTQPATTPAVI---TTVGTLAKLGGDDT-------GVAC 243 Salpingoeca ros...
XP_016843623 147 EVLQKEigAAYLTSRTLKFLSLESEA-------RRSFAEQYRRLPLVKTNAI---SIVGAIRKDSWNDI-------ACSY 209 jewel wasp
EFN86690     155 ELLLKElgAAFLSPRTLKFLSMDSNL-------RLSFAEQYRRVPLIKPNAL---TAIAIIRRDSWNDP-------ASSC 217 Jerdon's jumpin...
XP_016660355 157 QVLSSTigFVSLSTTSQQMLCLNECH-------VNEYFEKCRKTNLVKQHTI---TCVTELKRNMSDVH-------GVSC 219 pea aphid
XP_012338781 154 DLLLKElgAGFISPRTLKFLCMDKNL-------RASFAEQYRRIPLVKSNAL---TAISVIRRDSWNDP-------ASSC 216 little honeybee
ESO04536     238 IVIGCEDGHVYVINPETFSVAA-TYSLPSVAVFMVANGLFDVEYSIYTACRNGGVYGIK 295 Helobdella robusta
EAX92947     202 LLVGTESRCLLLLDSKDLKVDK-KWEFDSPPSAIIANGYMTGSSVIVVVCRDRIVKVis 259 Trichomonas vaginalis G3
Q22BU8       213 LVIGTENKKLYILDSAGMQIQK-TYEIASAPTSIICTGILQGDNRIIITTRDNQIQFIR 270 Tetrahymena thermophila SB210
Q3SE77       193 LIVGTELKFIYIYNQEITQIYK-KYEIPGVPISICIFSEEQKDGRIAVLVRENCVYFIg 250 Paramecium tetraurelia
EEH51790     248 VYFGTESGQLYVLHSSGTAVRS-VFQLPAAPAFVASTGVLEVDYRIVVACRDGKAYTIK 305 Micromonas pusilla CCMP1545
EGD72418     244 PVLGTEDGQVFVLNPTNFAAVV-RVSLPGPVACMTASGALDTDYRIHACTRDGTVCHIK 301 Salpingoeca rosetta
XP_016843623 210 LIVGTEFGEILIVDHRAFFVVE-KYTIGWPVVALTTSGLWMGDGQIVVTGRDGRIGAIK 267 jewel wasp
EFN86690     218 LILGTEAGETLILDPRAFLVMD-KHQLEWPPVAFASCGLWTGDGRIIVIGRDGKIGAIR 275 Jerdon's jumping ant
XP_016660355 220 LVIAT-TDMISILDTESFKILPdKYELQGETAYMSATGLYDVDYKILVATRTGRLYIFs 277 pea aphid
XP_012338781 217 LVLGTEFGEVLILDPRTFSIMD-KHLLQWPPVAFACIGLWAGDGRILIIGRDGKIGVIR 274 little honeybee
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap