Conserved Protein Domain Family
PaaSYMP

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pfam14738: PaaSYMP (this model, PSSM-Id:373258 is obsolete and has been replaced by 464290)
Solute carrier (proton/amino acid symporter), TRAMD3 or PAT1
PAT1 (proton amino acid transporter 1), also known as TRAMD3 of AAT-1, is the molecular correlate of the intestinal imino acid carrier. It is a proton-amino acid co-transporter having a stoichiometry of 1:1. Due to its mechanism, PAT1 activity increases at acidic pH, which correlates well with the acidic micro-climate close to the brush-border in the intestine. Glycine, proline, and alanine are the preferred substrates of the transporter. The maximum velocity is similar for the three substrates. All substrates are transported with low affinity, showing Km values in the range of 2-10 mM. The transporter does not discriminate between L- and D-isoforms of these amino acids; in addition, beta-alanine is transported with similar affinity as alpha-alanine. Similar to the IMINO transporter, the amino acid analog MeAIB is recognized by PAT1. The transporter is strongly expressed in the small intestine, colon, kidney, and brain.
Statistics
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PSSM-Id: 373258
Aligned: 56 rows
Threshold Bit Score: 120.717
Created: 29-Apr-2019
Updated: 18-Jul-2019
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
jgi:MICPUN_101640    220 TQSLYRESEAQTAPYEPEYFVPd-PNeRtakqaalaernateggaPELLSIRHLTFASGLPAGAAEAEHIEKMRAKRAFE 298  Microm...
11_pfamImport          1 TQTDFRESEAQTEPYTPTYRL---QGqSe----------------PEILTLASFALGNGLPVGENEILMIERARIKRNLE 61  
EDW55578             149 TQTLYRESSAQTLAYLPEIYDDdeARt------------------LELFTLPSVLPGDK-PPGLYEVEVFERARRRHKFL 209  Drosop...
Q9VJC4               166 TQTLYRESSAQTLAFLPEILNKdkSEt------------------FELYTLAKLLPGDK-PPGLHEVEFLERARRRWKFS 226  fruit fly
EDW39774             161 TQTLYREASAQTLAYLPETEDKeiDEh------------------LELFRLASALPGDK-PPGLYEVEVLERSRKRWAFN 221  Drosop...
EDW39777             165 TQTLYRESSAQTVAYLPEIMDKeiDEh------------------LELFCLPSLLPGDK-PPGLHEVEILERARKRWAFN 225  Drosop...
WGS:AAQB:GK18223-PB  160 TQTLYRESSAQTVAYLPDVMDK--EIvDg----------------LELFNLSAILPGDK-PPGLYEVEVLERARKRWAFN 220  Drosop...
EDW04125             176 TQTLYRESSAQTVAYLPDIMDKeqDEh------------------LELFNLATLLPGDK-PPGLNEVEILERARKRWAFN 236  Drosop...
WGS:AAPP:GF15094-PB  164 TQTLYRESSAQTLAYLPEIQEAe-KSqK-----------------LELFSLSQVLPGDK-PPGLQEVEILERSRRRWLFR 224  Drosop...
EDW55576             139 TQTLYRESSAQTMAYLPEIFEPnsVEt------------------LELFSLPSIFPVAN-RPGLHEVEILERARKRWAFS 199  Drosop...
jgi:MICPUN_101640    299 ASLP--------PLSDAASLPLRKKLMEEWEEAEWAEREMEIARLQEERLDILRRAIDAREEKAERVAEARLRRVRDGML 370  Microm...
11_pfamImport         62 ASLP--------PLTAT-NYRERIKQISEIEWAEWKYRDNQIQEIHDIKMELMKKLLSDEHDNFVNDSTKKMLRVWKNRE 132 
EDW55578             210 DALKlqikhqrhHDQKLDF-NRYKMMAEAFEWEHWMEREERIQECQMMRLEIVIKMFDKREREMHAASKTRIEQGCEKIE 288  Drosop...
Q9VJC4               227 KALKdnfkrllcEAREVSIKTQYKEILEAFEWEQWIQREEDIQQCQMMRLEIVIKMFDKREKEMHNASKARIEKSVQQIE 306  fruit fly
EDW39774             222 KALNtnlkrqlqEARELAMETKYKSILEAFEWESWIEREECIQECQKRRLEIVIKMFDKREKEMHLSSKKRIEMACEGIA 301  Drosop...
EDW39777             226 KAVKtnfmkqlhAARELTMQTKYKHILEAFEWESWIEREEYIQECQMMRLEIVIKMFDKREKEMHLASKTRIEIACERIE 305  Drosop...
WGS:AAQB:GK18223-PB  221 EALKtnfsrkmqDARKEAMNNKYKSIFEAFEWEHWIQREEYIQECQMMRLEIVIRMFDKREKEMHEASKTRIEMACERIE 300  Drosop...
EDW04125             237 QALKtsfrrqlhEAREKAIKSKYRPILEAFEWEHWMEREEYIQECQMMRLEIVIRMFDKREKQMHAESKTRIEVACEGIE 316  Drosop...
WGS:AAPP:GF15094-PB  225 DALKhnfqslfnEAREFEIKTKYKPILEAFEWEQWIEREESIQECQMMRLEIVIKMFNKREKEMHASSNARIEQACERIE 304  Drosop...
EDW55576             200 DALKvhfknllqDARKVAIKTELKDILEAIEWEQWIQREEDIQECQMMRLQIVIKMFDKREKEIHAASKTRIETACERIE 279  Drosop...
jgi:MICPUN_101640    371 SEKHKKFAAIQAKRLKALRK 390  Micromonas commoda
11_pfamImport        133 IGKDKLVKKLNKFRFRE--- 149 
EDW55578             289 KRRKAALRKNEIEYQRGMRR 308  Drosophila sechellia
Q9VJC4               307 KRRQDGLRKNEIEYQRGMRR 326  fruit fly
EDW39774             302 ERRQAALHKNEIEYQRGKRR 321  Drosophila persimilis
EDW39777             306 KRRQEGLHKNKMEYLRG--K 323  Drosophila persimilis
WGS:AAQB:GK18223-PB  301 KKRRIGLQKNEIEYQRGMRR 320  Drosophila willistoni
EDW04125             317 QKRQRGLAKNEVEYQRAMRR 336  Drosophila grimshawi
WGS:AAPP:GF15094-PB  305 KRRQAGLRKNEIEYQRGMRR 324  Drosophila ananassae
EDW55576             280 QRREAGLRKNEIEFQRGMRR 299  Drosophila sechellia
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