Conserved Protein Domain Family
PPR_2

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pfam13041: PPR_2 (this model, PSSM-Id:372443 is obsolete and has been replaced by 463778)
PPR repeat family
This repeat has no known function. It is about 35 amino acids long and is found in up to 18 copies in some proteins. The family appears to be greatly expanded in plants and fungi. The repeat has been called PPR.
Statistics
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PSSM-Id: 372443
Aligned: 215 rows
Threshold Bit Score: 46.5828
Created: 30-Apr-2019
Updated: 18-Jul-2019
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q9SAJ5        160 PDVFTYNVILRVMM-----R-EEVfFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYK 210 thale cress
EEF48986      393 RNPVTWNSMLSGYV-----Q-NEQ-HEEALKLYVTMKRSSVDCTRSTFSVLFRA-CS 441 castor bean
Q9LRV9        316 KNVVTYNAMISGFLqmdeiT-DEA-SSEAFKLFMDMQRRGLEPSPSTFSVVLKA-CS 369 thale cress
11_pfamImport   1 KDIVAWSAMICGYA-----Q-IGD-TEGAVRIFVQMAKEKIKPNEYTFSGIINACAA 50 
Q9FXA9         74 RDVVAWTAMITGYA-----S-SNY-NARAWECFHEMVKQGTSPNEFTLSSVLKSCRN 123 thale cress
XP_002308737  182 KNEVSWNALIAGYA-----R-KGQ-GDKAFCLFSNMLRENVKPTHFTYSSVLCACAS 231 black cottonwood
EEF30964      344 KDDVAWTAVISGFV-----S-NGE-YEEAFLWFIEMLKKAVKPNSLTFSSMLTASAS 393 castor bean
Q9ZUW3        360 GNVVSWTAMISGFL-----QnDGK--EEAVDLFSEMKRKGVRPNEFTYSVILTALPV 409 thale cress
EEF43274      276 KNVVTWTAMISGYG-----T-NGH-GRQAVQLFDEMKRRGPCPNSVTFVAVLSACAH 325 castor bean
EEF28132      379 QNVVSWNAIINGYG-----I-NGH-GEVALALYHEMRKGGEDPDSATYSCILSACSH 428 castor bean
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