Conserved Protein Domain Family
Tma16

?
pfam11176: Tma16 (this model, PSSM-Id:371407 is obsolete and has been replaced by 463236)
Translation machinery-associated protein 16
Proteins in this family localize to the nucleus. Their function is not clear.
Statistics
?
PSSM-Id: 371407
Aligned: 139 rows
Threshold Bit Score: 94.1156
Created: 2-May-2019
Updated: 18-Jul-2019
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
WGS:AAWC:PGTG_18412.3 107 VLSKLHPHSRRAKQITRIALRDDKLALNKKEKKK-LGNALTSRLIWFIEAnkqeartKDPsgqpalpipSA-DLSTLHVL 184 Puccin...
EPB91864               13 NREAIHPYSRKAHQITRVYQRKEKLAVKEKKKAN---NPLGERWLWFRYA-------FEEd-------kPVaTKPEMHEL 75  Mucor ...
Q38AJ7                  8 KVVVTHPKSRKVRQLQRQSRREKRISEQKGKRNA-KAALEAARFFWFREQ-------CLAlgr---tklAF-SREEAQVL 75  Trypan...
Q4Q0C2                 12 KRTVPHPRDRSVRQLEKKEKRAIRLEAHKTKLKM-EKTLQLMRFFWFREQ-------CIAlgy---tttAV-PEETVVQL 79  Leishm...
XP_004343793           13 AEKVIHPESREAKRMARSVLRLNRVTMSKDDHAHrQVDPLVQRVSWFQQH-------VSTet------tQV-LEVEMHVL 78  Capsas...
14_pfamImport           1 FEKCKHPNSRRIKSVSKKAKRMNNKHKKQLGHAI-KSNMMGEKLSWFLGQ-------IEEdr-----aePL-TPQEFIDL 66 
WGS:AANI:GJ15701-PA     8 LEKCKHPNSRKTKALGKKARRQNNKHKLRLGHAI-KSNLLGEKLSWFLGH-------IDEgr-----ttPL-SPQEFENL 73  Drosop...
EDW51075                8 LEKCKHPNSRKTKALGKKARRQNNKHKVRLGHAI-KSNITGEKLSWFLGQ-------IDEgr-----tePL-TPQELEDL 73  Drosop...
3_pfamImport            1 STKLLHPNSRTALNIVQQSRRHNLKLNKAKERAS-RLDSIVEKLLWFQSN-------LESd-------kCY-SKFEYTEL 64 
CBY24538               12 QKKAPHPNSRKALKLAGAKIREERLLLKEDRKAD-QIAARIEMFKWFQDE-------MRErla---dlkDF-TKADAQEF 79  Oikopl...
WGS:AAWC:PGTG_18412.3 185 ITsFIARNSSLINEETSKR----TkhfSN--RPKSTALEKLESLRRSELIEYS-TnGFLIPDLRTAENLKLL-DQWkdeh 256 Puccin...
EPB91864               76 IElYLERHDEEINELEKDR----S---RGhkKPKNARQQLLESIKAREASEYT-S-GMELPDMTNGKTLKLL-REW---- 141 Mucor ...
Q38AJ7                 76 TEqYLKRNDEEIVALKSMR------------NPTAGRIKILEAMKTSEADDFNsSkGIVIPDITNSDNLEILtSIW---- 139 Trypan...
Q4Q0C2                 80 VQlYVDRNKEEMSVLRLQR------------NPPVGRIKVLEATLQAEEDELHsAkGLQVPSMTDVDDVEILtEIW---- 143 Leishm...
XP_004343793           79 IQaYLRRNDQQLDEIRQEHa--sR---KS--RTKAAREDALDARIASETAEYN-S-GFQAPDLTVHKTLELV-KNF---- 144 Capsas...
14_pfamImport          67 IDeYLHRFDDELEQIKIKQsiskN---RS--TQHFARESAIKMTLDREVGEFN-GgGMEFLNLCDPIKFKSL-MDW---- 135
WGS:AANI:GJ15701-PA    74 IAlYLQRFDEELAQIALKQsigkH---RA--HQHAARRDVINITLERERNEYQ-SgGMEMLNLCDAAKFKAL-LDW---- 142 Drosop...
EDW51075               74 IElYFTRFDEELEQINLKQsigkH---RA--NQHAARKDVITMTLEKECNEFR-TgGLELMNLCDPLKLKML-RDW---- 142 Drosop...
3_pfamImport           65 VErYFTRFNDELEQIEIIRsvgcR---KP--IQHGARERSIKLAQEHELMLFN-StGLELPDVFNKKNFREF-MEW---- 133
CBY24538               80 FTkYLHRFDDELNQTMETNqtlkR-------RQTGSKLARINALLSKERQLIS-StGLDGPNLFNFKSLEDW-LSW---- 146 Oikopl...
WGS:AAWC:PGTG_18412.3 257 RCDRSFLARVKLIRLFK 273 Puccinia graminis f. sp. tritici CRL 75-36-700-3
EPB91864              142 DGDKNSMTRMTTIRLQK 158 Mucor circinelloides f. circinelloides 1006PhL
Q38AJ7                140 DGRADTAGVVRRVGLTR 156 Trypanosoma brucei
Q4Q0C2                144 DGAQETVTVVPLTSISM 160 Leishmania major
XP_004343793          145 SGNKAVLPALRMRSFKK 161 Capsaspora owczarzaki ATCC 30864
14_pfamImport         136 DGNAINIQHLKFELISR 152
WGS:AANI:GJ15701-PA   143 DGSALSVQHLKLDFVSH 159 Drosophila virilis
EDW51075              143 DGSALSVQHLKLDLVSH 159 Drosophila sechellia
3_pfamImport          134 DGTPQTLPRLKLMRFVK 150
CBY24538              147 DGEFDSMPRLKTKKWTL 163 Oikopleura dioica
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap