1USS,5WCU,1UHM,2LSO,2RQP,1GHC


Conserved Protein Domain Family
Linker_histone

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pfam00538: Linker_histone (this model, PSSM-Id:366156 is obsolete and has been replaced by 459846)
Click on image for an interactive view with Cn3D
linker histone H1 and H5 family
Linker histone H1 is an essential component of chromatin structure. H1 links nucleosomes into higher order structures Histone H1 is replaced by histone H5 in some cell types.
Statistics
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PSSM-Id: 366156
Aligned: 280 rows
Threshold Bit Score: 47.8765
Created: 23-Apr-2019
Updated: 18-Jul-2019
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1USS_A          7 SLTYKEMILKSMPQLNDGKGSSRIVLKKYVKDTFS-SklkTSSNFDYLFNSAIKKCVENGELVQPK--GPSGIIKLN 80   baker's yeast
ELW72893      458 cPPTRVMILTAVKEMNGKKGVSILSIYKYVSSTYR-Y---DVQRNRSLLKRMLKCLIFEGLVKQIKghGFSGTFTLG 530  Chinese tree shrew
XP_003200358  412 yPAVREMLLTAIKEMKVGKGASINAIFAYLRTMYK-Y---DTLKNRNHIKKILTKLISENIVEQIKgrGLAGSFKLG 484  zebrafish
XP_003978585  416 YPTVRLMLLAAIKEMRTGKGTSVNAIFSYIRSTYG-Y---DLFKNRTHIRKTLAKLISEGLVEQVKgrGLAGSFRLG 488  torafugu
XP_012428026  124 yPSLRVMILAAVKEMNVKKGASIIAIFKYISSTYR-Y---DTQRNKRLLKRTLEKLIAEQVVEQVKghGLAGSFKLG 196  zebra finch
XP_027856696  112 HPAVRVMLLNAIKEMRTGKGASVNAVFTYIRATYG-Y---DLLKNRNHIKKTLAKLINEGFVDRVKgrGLAGSFKLG 184  Monterrey platyfish
XP_007252026  407 yPAVRVMLLTAIKEMKVGKGASVNAIFTYLRSMYK-Y---DPLKNRSHVKKALAKLIAEGLAEQIKgrGLAGSFKLG 479  Mexican tetra
XP_015204205  424 YPTLREMLLTAIKEMKVGKGASVNAIFTYIRATYQ-Y---DLQRNRRLIKKTLTKLIGEEVVEQVKgrGLAGSFRLG 496  spotted gar
XP_008942943  158 RPKMDAILTEAIRACFQKSGASVVAIRKYIIHKYP-Sl--ELERRGYLLKQALKRELERGIIRQVKgkGASGSFVVv 231  carmine bee-eater
2RQP_A          9 rPKMDAILTEAIKACFQKSGASVVAIRKYIIHKYPsL---ELERRGYLLKQALKRELNRGVIKQVKgkGASGSFvvv 82   human
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