1B8K,1B8M


Conserved Protein Domain Family
NGF

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pfam00243: NGF (this model, PSSM-Id:365973 is obsolete and has been replaced by 459728)
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Nerve growth factor family
Statistics
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PSSM-Id: 365973
Aligned: 29 rows
Threshold Bit Score: 146.673
Created: 19-Apr-2019
Updated: 18-Jul-2019
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1B8K_A         8 RGEYSVCDSESLWVtDKSSAIDIRGHQVTVLGEIKTGNSPVKQYFYETRCKE---------------------ARPv--- 63  human
Q91988       151 RGEYSVCDSINTWV-NKTRATDMSGNEVTVLSHVTVNNKVKKQLFYETTCRSpthrssgiviggrsggrggkqGSKt--- 226 southern platyfish
P34129        84 RGVYSVCESVSVWVgNKTKATDISGKEVTVLPYVNINNVKKKQYFFETTCH----------------------SPPs--- 138 southern platyfish
P13600       130 RGEFSVCDSISVWVgDKTTATDIKGKEVMVLGEVNINNSVFKQYFFETKCR----------------------DPNp--- 184 cattle
Q9J5D9        73 EGIYLSCESSSTWVaNKTTVFDHRGNKLELLDQIVHNKQVYYQYLFETKCKEyp-------------------------- 126 Fowlpox virus
ETE63701     133 RGEYSVCDSISVWVaNKTTATDIKGKPVTVMVDVNLNNHVYKQYFFETKCR----------------------NPNp--- 187 king cobra
XP_006895739 132 RGEFSVCDSVSMWVgDKTTATDIKGKEVMVLKEVIINNVVYKQYFFETKCQ----------------------NPNp--- 186 Cape elephant s...
XP_015197626 123 RGEYSVCKSISTWVgNKTKATDIKGQEVSVLAEFNINNVVKKQYFFETTCA----------------------GNDs--- 177 spotted gar
XP_003963333 149 RGEYSVCESINTWVgNLTQATDISENEVMVLPNVTINNVVKKQFFYETTCRSpthrgpgtanggkpggrsgkqATKa--- 225 torafugu
XP_007234674 104 RGEYSVCDSENRWVgNLTRATDVAGNEVTVLPDVRINEVVKKQFFYETTCR----------------------VNKvsga 161 Mexican tetra
1B8K_A        64 ------------KNGCRGIDDKHWNSQCKTSQTYVRALTSENNKlVGWRWIRIDTSCVCALSR 114 human
Q91988       227 -----------gNSGCRGIDSRYWNSHCTNTDIYVSALTVFKEQ-TAWRFIRINAACVCVLSR 277 southern platyfish
P34129       139 -----------gGSRCLGIDARHWNSHCTNSHTFVRALTSSENQ-VAWRLIRINVACVCVLSR 189 southern platyfish
P13600       185 -----------vDSGCRGIDAKHWNSYCTTTHTFVKALTMDGKQ-AAWRFIRIDTACVCVLSR 235 cattle
Q9J5D9       127 -----------aISGCLGIDTRFWSSYCSTSHSFVNSIVIKNGM-PSWEYIRIGTSCVCVVQL 177 Fowlpox virus
ETE63701     188 -----------vPSGCRGIDSRHWNSYCTTTHTFVKALTMEGNR-ASWRFIRIDTACVCVISR 238 king cobra
XP_006895739 187 -----------vDNGCRGIDSKHWNSYCAPNYSFTRALTLDDRQ-TAWRFIRINTACVCVISR 237 Cape elephant shrew
XP_015197626 178 -----------gSSGCLGIDSRRWNSYCTNTHTFVRALTVDKKL-VAWRYIRINTACVCVLSR 228 spotted gar
XP_003963333 226 -----------gNSGCLGIDSRHWNSYCTNTHIYVSALTLYQKR-TAWRYIRINAACVCVLSR 276 torafugu
XP_007234674 162 prgrgasglkagTSGCRGIDNKHWNSYCTNTHTYVRALTSFKNQ-IAWRLIRINAACVCVLSR 223 Mexican tetra
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