Conserved Protein Domain Family
RING-HC_PEX10

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cd16527: RING-HC_PEX10 (this model, PSSM-Id:319441 is obsolete and has been replaced by 438190)
RING finger, HC subclass, found in peroxin-10 (PEX10) and similar proteins
PEX10, also known as peroxisome biogenesis factor 10, peroxisomal biogenesis factor 10, peroxisome assembly protein 10, or RING finger protein 69 (RNF69), is an integral peroxisomal membrane protein with two transmembrane regions and a C3HC4-type RING-HC finger within its cytoplasmically exposed C-terminus. It plays an essential role in peroxisome assembly, import of target substrates, and recycling or degradation of protein complexes and amino acids. It is an essential component of the spinal locomotor circuit, and thus its mutations may be involved in peroxisomal biogenesis disorders (PBD). Mutations in human PEX10 also result in autosomal recessive ataxia. Moreover, PEX10 functions as an E3-ubiquitin ligase with an E2, UBCH5C. It mono- or poly-ubiquitinates PEX5, a key player in peroxisomal matrix protein import, in a UBC4-dependent manner, to control PEX5 receptor recycling or degradation. It also links the E2 ubiquitin conjugating enzyme PEX4 to the protein import machinery of the peroxisome.
Statistics
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PSSM-Id: 319441
Aligned: 37 rows
Threshold Bit Score: 59.9228
Created: 3-May-2013
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Zn binding siteRING-HC finger
Feature 1:Zn binding site [ion binding site]
Evidence:
  • Comment:Based on the structural evidence that Homo sapiens BRCA1 (1JM7) binds two Zn2+ ions through its RING-HC finger.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1         #  #           # #  #  #               #  # 
3914299      272 LCTLCLEERrhPTATPCGHLFCWECITAWCss-----kaECPLCR 311 human
EFC46358     363 KCCLCLERRvkTTATMCGHLYCWDCITECVsns---kepKCPICR 404 Naegleria gruberi strain NEG-M
KNH03660     255 KCILCLESIreATSTGCGHLYCWDCIVEYCvqtkpplvpFCPLCR 299 Perkinsela sp. CCAP 1560/4
XP_011404444 230 KCSLCLENCtcPTVPPCGHLYCWSCIIEWVse-----kgNCPLCR 269 Amphimedon queenslandica
EDV24255     244 KCCLCLESCqhPTCTPCGHIFCWHCIAGWCrt-----kpECPLCR 283 Trichoplax adhaerens
Q9UUF0       255 KCSLCMEFIhcPAATECGHIFCWSCINGWTsk-----ksECPLCR 294 Schizosaccharomyces pombe 972h-
GAA97940     386 RCTLCLGPRrdPASTECGHTFCWECIVGWAre-----kpECPLCR 425 Mixia osmundae IAM 14324
EEC15528     214 SCCMCVDGArrPTVIPCGHVFCWYCIAGWLra-----kkECPLCR 253 black-legged tick
EDO98427     155 QCPLCLSPKshPASTPCGHTFCWSCIATWCge-----kpECPLCR 194 Chlamydomonas reinhardtii
EAA34967     376 MCTLCLEELkdPAATQCGHVFCWSCIGDWVre-----kpECPLCR 415 Neurospora crassa OR74A

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