3IXS


Conserved Protein Domain Family
YAF2_RYBP
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pfam17219: YAF2_RYBP (this model, PSSM-Id:319237 is obsolete and has been replaced by 465386)
Yaf2/RYBP C-terminal binding motif
This motif is found in the Yaf2 and RYBP proteins that are homologous parts of the PRC1 complex. This motif forms a beta hairpin structure when it binds to the RAWUL domain pfam16207.
Links
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Statistics
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PSSM-Id: 319237
Aligned: 20 rows
Threshold Bit Score: 27.222
Created: 30-Jul-2016
Updated: 4-Aug-2016
Structure
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Program:
Drawing:
Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
3IXS_B         3 RPRLKN-VDRSTAQQLAVTVGNVTVIITDFKEKT 35  human
ETE69010      49 TPDVGE-RWKRPGSRHPVTVGNVTVIITDFKEKt 81  king cobra
XP_008213288  79 PPRLKN-IDRSTAQSNEVTVNNVTVVITEYKPKV 111 jewel wasp
EHJ63436      85 PPRLNN-VDRSSAQTREVTVSGVTVVITEYKPKK 117 monarch butterfly
XP_002428005  99 LRKLKN-VDRNSAETREVTVNNITVMITEYKPKP 131 human body louse
CDS30653     114 PTFPRNaVDRTCPQQFEVFANGFSVVITEYLPKV 147 Hymenolepis microstoma
ENN78239      94 LPRLKN-VDRSTAQTREVTVNSITVVITEYKPKI 126 mountain pine beetle
XP_780545     92 RPRLKN-VDRSTAISTQVVVNDVPVIITEYREKA 124 purple sea urchin
KFD48692     181 DHQLLT-LDVNSARTLAVTADDVTVIITDYSLTP 213 pig whipworm
XP_009060507  90 RSRLKN-IDRLGGEKMEVTVNDVTVLITDYKPKQ 122 owl limpet
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