Conserved Protein Domain Family
NKAP

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pfam15692: NKAP (this model, PSSM-Id:317995 is obsolete and has been replaced by 464805)
NF-kappa-B-activating protein
NKAP is a family of eukaryotic proteins that interacts with NF-kappa-B. It is a nuclear regulator of TNF- and IL-1-induced NF-kappa-B activation. NKAP does not interact with RIP in mammalian cells family is often found in association with pfam06047.
Statistics
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PSSM-Id: 317995
Aligned: 46 rows
Threshold Bit Score: 31.5885
Created: 30-Jul-2016
Updated: 4-Aug-2016
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q5SZT7       112 KEKEESY-----R--Q------RRLKERERigelGAPEVWGLS------PKIPEPDSDEHTPAEDE-----------VKN 161 house mouse
Q17GI0        38 NVMRKAR-----AfpNet--wdKKLLEVEE----KDPNRWRHTgfkkmyIEEDPSSSDSERGrygng------mpprGRS 100 yellow fever mo...
XP_012224935  45 NVMRKAResqssY--Wn-----KKLLEAEE----RDPNRWRHSgykelyVGGT-SSGEPSRGHPRSp----------KSP 102 Argentine ant
XP_006617744  45 SVMRKAResqssY--Wn-----KKLLEVEE----RDPNRWRHSgykelyVGGT-TSGEPSRGHPRSp----------RSP 102 giant honeybee
XP_016772924  45 SVMRKAResqssY--Wn-----KKLLEVEE----RDPNRWRHSgykelyVGGT-TSGEPSRGHPRSp----------RSP 102 honey bee
XP_016921756  45 SVMRKAResqssY--Wn-----KKLLEVEE----RDPNRWRHSgykelyVGGT-TSGEPSRGHPRSp----------RSP 102 Asiatic honeybee
XP_008190447  48 TVMKKAR-----AspNsnaywdKKLLEVEA----KDPNRWRHSgykslyIDGSSSPSSGHRSRSRSptgr---rsppRRS 115 red flour beetle
XP_002006237  39 NVMKKAR-----AntTndy-wdKKLIEAEE----KDPNRWRHTgykkmyIQGESSSGESERDSAQAsysrysgapgnAGP 108 Drosophila moja...
ETN58786      56 NVMKKAR-----AfpNet--wdKKLLEAEE----KDPNRWRHSgykklyLEDDPSSSDSERPVrfg-------------- 110 Anopheles darlingi
EFX79336      71 RVMERAR-----TegGnr--wtKKLLDEEA----KDPDRWGHSgfkemyKNELGISRs-------------------RRS 120 common water flea
Q5SZT7       162 QKSS--SS--DFTNEEKRTKTSHSTKKKR 186 house mouse
Q17GI0       101 RSRS--RS--R---SRSRSARSPPLRHRR 122 yellow fever mosquito
XP_012224935 103 RPRSphSP--RPRTPRVRSPRSPRERSSR 129 Argentine ant
XP_006617744 103 RPRS--PHiqRPRSPRTRSPRSPRDKSHT 129 giant honeybee
XP_016772924 103 RPRS--PHiqRPRSPRTRSPRSPRDKSHT 129 honey bee
XP_016921756 103 RPRS--PHiqRPRSPRTRSPRSPRDKSHT 129 Asiatic honeybee
XP_008190447 116 PVRR--SP--V----SRRSPRSPIARRSP 136 red flour beetle
XP_002006237 109 PPSS--AS--S--SARYGRSRSPHSRSRS 131 Drosophila mojavensis
ETN58786     111 -----------ngGRRSRSPRSP-PRNRR 127 Anopheles darlingi
EFX79336     121 RSRE--KT--S--ARRSRSRERAHKIESG 143 common water flea
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