Conserved Protein Domain Family
FAM104

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pfam15434: FAM104 (this model, PSSM-Id:317790 is obsolete and has been replaced by 464715)
Family 104
This family of proteins is found in eukaryotes. Proteins in this family are typically between 113 and 185 amino acids in length. There is a conserved SLQ sequence motif.
Statistics
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PSSM-Id: 317790
Aligned: 15 rows
Threshold Bit Score: 74.4408
Created: 1-Aug-2016
Updated: 4-Aug-2016
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4_pfamImport    1 RKRRRNGNEDDS-------------HI-PQTKRSTRNTVL----QDSWDTEkvavtknskeh-rlkgnkvscaSSSSDSG 61 
1_pfamImport    1 MKRRPDDNEDDN-------------YRpPRSKRIKKDQDI----QEHHAIE----------------------STSSDNE 41 
14_pfamImport   1 RKRRRGCDAEEL-------------QVlPQPKRSGGYSFLpevgHDVWDSE----------------------SSSSDSS 45 
10_pfamImport   1 RKRRRNGSEEDH-------------HLpPQTKRSSRNAVF----HDSWDTEnkvpvtrnskenrlsgnkvlcmSSSSDSG 63 
6_pfamImport    1 ------GGAEETpevavvrvraggiHRlPSPP-VRR--------QEQRAEE----------------------SSSSDSG 43 
3_pfamImport    1 RKRRRNGIEEDG-------------LI-PQTKRSSRNAVF----QDSWDTEqvlvskds-------rrhiscmSSSSESG 55 
15_pfamImport   1 RKRRRNGNEDDG-------------HI-PQTKRSTRNSVL----QDSWDTEkvavtkltker-rlkgnkvpcaVGSSPSI 61 
XP_013220397   40 RKRRRDSNLEDN-------------HHcSHFKRTKRNFVF----QDFQNTEtvleskssae--sqlsgnqmyaSSSSVIE 100 thirteen-lined...
XP_015331439   24 RKRKRDGNQEDN-------------HHcFHSKRTRRNLLF----QDSQDKE----------------------YSSSVTE 64  Alpine marmot
XP_005988123    6 RKRRRSCEDEDI-------------HLlPQPKRISSNTFL----HDFWDTE----------------------SS----S 42  coelacanth
4_pfamImport   62 SSSSscs-ssSINSPDRASG---PEPSLNP-----IVTGSSPVS-SQSFHEQ-SAls---qgPYFHINQILKEAHFHSLQ 127
1_pfamImport   42 RNQG------SINNPNRERV---PESSLNP-----STAELDSNI-PGFSQEEdYEvcq-dqdPYSHINNILKEAHFYSLQ 105
14_pfamImport  46 GISS----------PEQMAG---ATSSIQKpdqrgIYISQAPCS-PGIAVEE-PAvslshsiSYDHINRILREAHFSSLQ 110
10_pfamImport  64 GSSSs-----SINSPDRASG---PESSFNH-----LASGSSPHT-PQPVPEP-SAlc---qgPYFHINQTLKEAHFHSLQ 125
6_pfamImport   44 GSSSt-----SIHSPDRASG---PESGLSQ-----VMPGSSPNT-PQPMPEQ-SAlc---qgPYFHINQTLKEAHFHSLQ 105
3_pfamImport   56 STSScc--ssSISSPDRRSG---PETSPPQ-----IMPGSSPVTpPQSFLEQ-SAlc---qgPYFHINQILKEAHFHSLQ 121
15_pfamImport  62 ACDSlccsasSINSPDRA------ESSLNP-----RIAGSSPVS-SQPFHEQ-SAls---qgPYFHINQILKEAHFHSLQ 125
XP_013220397  101 RNIS------SIHSPVRAGG---PESSLNQ-----IIAEYNLNT-RQFFHEE-NMls---qgHYCQINQILKEAHFYSLQ 161 thirteen-lined...
XP_015331439   65 RNIS------SIHSPERAGG---PESNINR-----IAAEHDLST-CQFLHEE-NMls---qgPYCQINQILKEAHFYSLQ 125 Alpine marmot
XP_005988123   43 SDSS------GVSSPDRPSGllpADIGVNQ-----RNPGCSPSTsYQYPYEQ-SAls---hgSYVHINQILKEAHFHSLQ 107 coelacanth
4_pfamImport  128 SrGRPPT 134
1_pfamImport  106 QrGHSPT 112
14_pfamImport 111 TrGQ--Q 115
10_pfamImport 126 HrGRPPT 132
6_pfamImport  106 HrGRPLT 112
3_pfamImport  122 SrGRPPT 128
15_pfamImport 126 SrGRLPT 132
XP_013220397  162 QrGQPPT 168 thirteen-lined ground squirrel
XP_015331439  126 QrGQPPT 132 Alpine marmot
XP_005988123  108 HrGNPLT 114 coelacanth
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