3FHN


Conserved Protein Domain Family
RINT1_TIP1

?
pfam04437: RINT1_TIP1 (this model, PSSM-Id:309542 is obsolete and has been replaced by 461309)
Click on image for an interactive view with Cn3D
RINT-1 / TIP-1 family
This family includes RINT-1, a Rad50 interacting protein which participates in radiation induced checkpoint control, as well as the TIP-1 protein from yeast that seems to be involved in a complex with Sec20p that is required for Golgi transport.
Statistics
?
PSSM-Id: 309542
Aligned: 64 rows
Threshold Bit Score: 309.167
Created: 20-Jul-2016
Updated: 4-Aug-2016
Structure
?
Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
3FHN_A       244 WNFKSLANNFNVRFTYHFH---ATSSSSKIETYFQFLNDYLAENLYKCINIFHD--DCNGLTkpvihEQFINYVLQPIRD 318 baker's yeast
XP_001630572 241 LPLDWLLKPLRKRFKFHFYgkkQTNNLEKPEWYFTQILNWIKSHGDFLQHTVQPvlDKAELSfidakLEFIRGLLAVTTE 320 starlet sea ane...
XP_001601502 245 lpvtllvlplKQRFLYHFTgvkQTNRRDKPEWFLTQTLTWIRDHFEWVEKMVQPiaYTAGFDkinvkVQFMRALVQLAVE 324 jewel wasp
EFX76487     255 LAIQELIYPLLKRFLYHFGgnrPTNRRDKPEWFLRQILQWIGDHAKFLETNVQPlyAPNda-----lTDFSRGLVQLAVE 329 common water flea
XP_015787512 225 LPLQLMVKPLRKRFTYHFMtnvRTNQLSKPEWYLTQIMNWIKDHENFLSEHVTVlfKDQETEfaslkIQFTCALLELAAD 304 two-spotted spi...
XP_015207675 211 LPIQIMLLPLSKRFRYHFTgnrQTNTPNKPEWYLTQVLMWMGNHSAFMEEKIQPilDRDGARin-arVELCRGLLSLALE 289 spotted gar
XP_003455706 288 LPIQIMLLPLNKRFKYHFYgnrQTNSLSKPEWYLTQVLMWMGNNSTFMEETIQPilDRGGVTls-akVELCRGLLSLVQE 366 Nile tilapia
XP_003972690 284 LPIQIMLLPFRKRFRYHFCgnrQTSSLSKPEWYLTQVLLWMSNNSTFMEEKIQPilEGAETHls-arVELCRGLLALVQE 362 torafugu
XP_006925439 304 LPIQIMLTPLQKRFRYHFRgnrQTNVISKPEWYLAQVLLWIGNHTEFLDEKIQPilDKVGSSin-arLEFSRGLMMLVLE 382 black flying fox
XP_011252605 246 LPIALLVRPLRLRFIYHFTgakLTNRQDKPEWFFTQILTWIKDHVQWVQKYIQPiaDSIGFRhldikAEFMRALVQLAVE 325 Florida carpent...
3FHN_A       319 KVRSTLf--qNDlkTLIVLISQILATDKNLLN-SFHYHg------lGLVs--LISDEVWEKWINYEVEXANRQFINITKN 387 baker's yeast
XP_001630572 321 KMIHSLpellADeaVFSHFVDETLLFHKELHE-LYNYPltdhs-----clkvLTRKQCLGKWVELERKYAIENMESLLAS 394 starlet sea ane...
XP_001601502 325 KLNSELaivqFDdaLFAHTVDEALGFERELRE-SLFYPase-----paTvfvLTQAQIFVKWITMEKKYATERMDAILSS 398 jewel wasp
EFX76487     330 KLVKDTpailEDdtILAHTIGEVLSFESELRS-SYNYPssq-----psAllvLSQPQFFTRWIALERAFAVEKMDILLIS 403 common water flea
XP_015787512 305 KLAKDLtklsADdkLFSHAFDEVLLTQRELEDiNQDWLslfrencnLLSl--FAVEPYFTRLRNIERRRSMEYIETIISS 382 two-spotted spi...
XP_015207675 290 KLAADAprllFDdaLFCHLVDEVLQFERELRG-THAYPstl---pgALHi--LLDDAVFQKWLSVEKKLAVEKVDALLAA 363 spotted gar
XP_003455706 367 KVASDAskllYDdvLFCHLVEEVLQFEKELRS-NHSYPael---pgVLHl--LLEDAVLQKWLTMEKKMAVEKMDAMLSA 440 Nile tilapia
XP_003972690 363 KVASDAlrllYDdaLFCHLVEEVLQFEKELRS-KLSYPpal---pgLLHl--LLENTVLQKWLTVEKKMAVEKMDAMLSS 436 torafugu
XP_006925439 383 KLAADIpcllYDdnLFCHLVDEVLLFERELHS-VHGYPgtf---anCLHi--LSEETCFQRWLTVERKFALQKMDSTLSS 456 black flying fox
XP_011252605 326 KLHSELpttqYDdtLFAHLVDEALGFERELRE-TLLYPqaq---paTVFv--LTQAHIFIKWINMEKKYATEKMDAILSS 399 Florida carpent...
3FHN_A       388 PEDF-------------------PKSSQNFVKLINKIYDYLEPFYDLDfdllvrYKLXTCSLiFXNLTSSYLDYILTVDs 448 baker's yeast
XP_001630572 395 ENAWrpkyedve---cgademraPECAEGFITILTVMTDRYRHLPGLD------EQSRFLAv-QLDLLKDFitl------ 458 starlet sea ane...
XP_001601502 399 DTAWarlpsfi------kddmkvTECADAFLTLLSTISDRYNHLPQPG------HRLQFL-DlQLELIDDWRVRLLQLL- 464 jewel wasp
EFX76487     404 DKAWtcvsgdns---eaedevrlTECGEGFLQMLLAITDRYKILPQPG------HKLQ-FLDlQLELLDEFRIRLLQLa- 472 common water flea
XP_015787512 383 ETAWsplvtsiddedededilkvPEIADNFILMLQSITDRFSHLSKIS------HQYAF-IVlELEMLADFHLRLSQIY- 454 two-spotted spi...
XP_015207675 364 EGAWssqyrdia----dldelkvPDCAETFMTLLLVITDRYRSLPSPR------ARLSFLAL-QKELVDDFRIRLTQVM- 431 spotted gar
XP_003455706 441 ERAWssqykdis----dmddlkaPDCAETFMTLLQVITERYRTLPCPS------AQLKFLEL-QKELVDDFRIRLTQVM- 508 Nile tilapia
XP_003972690 437 EGAWscqykemc----dmdelraPDCAETFMMLLQVITERYRYLTCPS------AQLKFLGL-QKELLDDFRIRLTQVM- 504 torafugu
XP_006925439 457 EAAWisqykdit----dvdemkvPDCAETFMTLLLVITDRYKNLPTAS------RKLQFLEL-QKDLVDDFRIRLTQVM- 524 black flying fox
XP_011252605 400 STAWeklaspd------iddmkvTECADAFLTLLITISDRYKHLPQPG------HRLQFLEL-QLELIDDWRVRLLQLL- 465 Florida carpent...
3FHN_A       449 lnetrTKEQEL-------YQTXAKLQH-VNFVYRKIKSLSSNFIFIQLTDIVnstes----------------------- 497 baker's yeast
XP_001630572 459 --lslTAEESAsn---pvDACFISVLNaTSYIGFLLEDWNDQTLFLQLHGYFssend----------------------- 510 starlet sea ane...
XP_001601502 465 -----HEDYKDp-----lLSLMPSILNtLYYVTIILQDWGVSVPFLKLYFFKkqfedaevvmhedd---------fsdsf 525 jewel wasp
EFX76487     473 -----RQDKFHelfahrsSPNISPILNtLTAVINVLDDWTDLPFFVQLHSYKvqtenierlaaeaisndeaslpwlrtqa 547 common water flea
XP_015787512 455 -----RSLDSEglnqwpfTQRFFSIINtLNYVILLLNNWKNLPVFQDMSEFslk-------------------------- 503 two-spotted spi...
XP_015207675 432 -----KEESRCp-----lGPRYCAILNaTNYVSAVLADWADNVFFLQLQQAAvdmgeevlgnlgv------------tet 489 spotted gar
XP_003455706 509 -----KEESRCp-----lGVRYCAILNaVNYISTILGDWGDDVFFLQLQQTAvslgeeaipgglg-----------imem 567 Nile tilapia
XP_003972690 505 -----KEDSRYp-----lSARYCAILNaVNYISTILRDWGDNVFFLQLQQAAvslndevllgglg-----------lmel 563 torafugu
XP_006925439 525 -----KEETRAs-----lGFRYCAILNaVNYISTVLADWADNVFFLQLQQAAlevfaenntlsk-------------lel 581 black flying fox
XP_011252605 466 -----HENYEDp-----lTSLMPHILNtLHYVATVLEEWGVTAHFLQLQFFKkqfeavenatdrg-----------sdvs 524 Florida carpent...
3FHN_A       498 ----kkynsLFQNVENDYEKAXsTDXQNSIVHRIQKLLKETLRNYfKISTWstlexsvdenIGPssvPSAELVNSINVLR 573 baker's yeast
XP_001630572 511 ----sgdcgVFDEPLKSLCELQ-KYMSGLIVEDVVKGFRAKCKAY-RKERWhslpspkelaVMV---LSSGACDFLVYLK 581 starlet sea ane...
XP_001601502 526 iedsekeitVFDEVISLLQRLE-NKLMTEIGDFVFMEIKAKSRPY-CNEKWfamsfdkdtiP-S---VTPTGCPMFQEVA 599 jewel wasp
EFX76487     548 htnrdeegsVFDSIIELLKRMQ-EDLLRRLVEAVMLEVKAKSQPY-RLDKWaslpnpdefiQPS---LSPTGSAMLQAVA 622 common water flea
XP_015787512 504 -------dsIFEDSLSLYNHMV-NEMKKRIVDSLMKLIMEKIKAYaSL-RWhcftlldddmQ-------YISYQLFYLIS 567 two-spotted spi...
XP_015207675 490 grlaslegsVFEGLLGLLDRLR-GDMLGRLLDAVLRDVKDKAQPY-CREKWlslpsqadqaTMS---LSSSACPMMLCLR 564 spotted gar
XP_003455706 568 grlaslegsLFDGLLALLDRLK-GDMLGRLLDFLMREIKEKAKPY-CQERWlslpsqqdqsTMS---LSSTACPMMLCVR 642 Nile tilapia
XP_003972690 564 gqlaalegsLFDSLLALLDRLK-GDMMGRLLDWTMREFKEKAKPY-SQNRWlsfpsqqdqsSMS---LSSSACPMMLCLR 638 torafugu
XP_006925439 582 gqlasmessVFDNMINLLERLK-HDMLTRQVDHVFREVKDAAKLY-GKERWlslpsqseqaVMS---LSSSACPLLLTLR 656 black flying fox
XP_011252605 525 esigeiegtVFDEAVALLQRLE-RELIKEISDSVALDVKAKSRAY-RTDKWfamqsskeiaSLS---VTPSGCPMFQELA 599 Florida carpent...
3FHN_A       574 RLINKLDSXdIPLAISLKVKNELLNVIVNYFTEsILKLNKFNQNGLNQFLHDF-K-SLSSiLSLPShatNYKCXSLHELV 651 baker's yeast
XP_001630572 582 DRLNTLQKL-LAYKLFSALWVDLARALNMLIYQeVIQECRYNEGGAAQLQFDM-K-NLFTlFGEYTqkpENYYKEVKECC 658 starlet sea ane...
XP_001601502 600 NRLNGLNNA-LALPLFERSWISLAKRLDQYLFDeLVLRNQFNAGGAAQLQFDIkR-NLFPlFGLYTnksDSYFSLIGEAC 677 jewel wasp
EFX76487     623 IGLLWLKDS-LASTMFVEAWQKLASQVNDFLLEeLILQRQFNEGGASQLCFDIqQ-NLIPlFGQYTtkpEIYFKELKDAC 700 common water flea
XP_015787512 568 KSLELLKRK-LSHNILEELIETIADSIKTAIMKeVIYNNSFNGEGAQQLHRDV-NiNLFSvFRVYTpnpESLIIELVEAC 645 two-spotted spi...
XP_015207675 565 DRLLQLQQL-LCVPLFQSCWQGLAERLDLFIYQeVILSSHFNEGGAAQLQFDMtR-NLFPlFGHYCkrpENFFKHVKEAC 642 spotted gar
XP_003455706 643 DRLLNLHQV-LGFSLFHLAWQGLAERLDNFLYQdVILCNNFSDGGAAQLQFDMtR-NLFPlFGHYCkkpENFFKHVKEAC 720 Nile tilapia
XP_003972690 639 DRLLSLHQL-LGLSLFQLTWQGLAERLDHFLYQdVILANHFSDGGAAQLHFDMsR-NLFPlFGQYCkrpENFFKHVKEAC 716 torafugu
XP_006925439 657 DRLLQLEQQ-LCISLFKIFWQMLAEKLDIYIYQeIILANHFNEGGASQLQFDMtR-NLFPlFSHYCkrpENYFKHVKEAC 734 black flying fox
XP_011252605 600 TRLHVLHNA-LALPLFNQAWKSLAVQFDQFLFEeVVLVNRFNNGGAEQLQYDVlR-NLFPlFGLYInkpESYFPLIKEAC 677 Florida carpent...
3FHN_A       652 KILKLKYDpnnqqfln-------------peyiktgnFTSLKEAYSIKyLKDTKIQDALYRI 700 baker's yeast
XP_001630572 659 ILLNQMPGsaillieslqa--------ahahdestnaPQATLNEMGVYkLSSHDALRILNLR 712 starlet sea anemone
XP_001601502 678 ILLNMLIGsamlliea-------------ledeeenlNKEVLADVNIYqLSGRMALKVLKSR 726 jewel wasp
EFX76487     701 TLLRLPRPitlllldtlsvaiqdsestsvksnratfnGKQALKDQGIKkLSVEDSLSVLRRR 762 common water flea
XP_015787512 646 QLLNLAKGnslllqdt---------------lrkgnvsdDILKDFNVHhLSAKVAHKILSKR 692 two-spotted spider mite
XP_015207675 643 IVLSLSVGsalllrdvlqqgd---sgsdvtsdpsqpsPVAALNEVGIYkLSPGDVLILLNLR 701 spotted gar
XP_003455706 721 IILCLNVGsaillrslikesd----mtrdcagtgdppPESALNELGVYcLAPCDVLILLSLR 778 Nile tilapia
XP_003972690 717 IILRLSVGsaillrnvleeae----eetdagdherptLMSTLHELGVYcLAPCDVLYVLRLR 774 torafugu
XP_006925439 735 IVLNLNIGsalllkdvl------------qsasgqppATAALNEVGIYkLAQHDVEILLNLR 784 black flying fox
XP_011252605 678 ILLNILIGsaillqet--------------lnnndknALEVLADIGVHkMSPELALKVIATR 725 Florida carpenter ant
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap