3OTK


Conserved Protein Domain Family
Branch

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pfam02485: Branch (this model, PSSM-Id:308216 is obsolete and has been replaced by 426795)
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Core-2/I-Branching enzyme
This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme. I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. This is a fmmily of glycosyl-transferases that are Type II membrane proteins that are found in the endoplasmic reticulum (ER) and Golgi apparatus.
Statistics
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PSSM-Id: 308216
Aligned: 44 rows
Threshold Bit Score: 205.588
Created: 14-Jul-2016
Updated: 4-Aug-2016
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3OTK_D  86 IAYSIVVhH-KIEMLDRLLRAIYMPQNFYCIHVDRKaEESFLAAVQgi------aSCFDNVFVASqLESVVYASWTRVKA 158 house mouse
Q9LR71 103 LAYLISGtKgDSHRMMRTLQAVYHPRNQYVLHLDLEaPPRERMELAmsvktdptfREMENVRVMAqSNLVTYKGPTMIAC 182 thale cress
Q9LFQ0  88 LAYLISGsSgDGQMLKRTLMALYHPNNQYVVHLDREsSPEERLDLSgfvanhtlfQRFQNVRMIVkANFVTYRGPTMVAN 167 thale cress
Q9SS69  54 FAYLISAsKgDAGKLKRLLRSLYHRRNHYLIHLDLEaPEEEHLEMIrfvageplfQPEGNVMIVGkPNLVTYRGPTMLAT 133 thale cress
Q6DBE8  83 FAYLVSGsKgDLESLWRTLRALYHPRNQYIVHLDLEsPVDERSELAsrisndpmySKAGNVYMITkANLVTYTGPTMVAN 162 thale cress
Q9C9A1  49 FAYYITGgRgDNDRISRLLLAVYHPRNRYLIHLGAEaTDAERLALLsdlksvpavNAFGNVDVLGkVDRLSENGASKIAS 128 thale cress
Q9LIQ3  69 IAYLISGsSgDTRRILRLLYATYHPRNRYLLHLDSLaTQSERDRLAvdvqdvpifRAARNVDVIGkPDFAYQRGSSPMAS 148 thale cress
O76634 162 VAFARIVyT-DYEMIEKQVQMSYHPQNSFCFAIDKKaPSQFHERLRam------aACLPNVLLLPdEESVDSAGHNINLA 234 Caenorhabditis elegans
O02312 472 IAFARIVyK-DYEFIEKQVQVSFHPQNAFCFVIDINaSEEFKKRMRal------aACMPNVIVLAdEDPVYSSGHNVNLV 544 Caenorhabditis elegans
O16776 131 TAFARIVfA-DYEFIEKQVQASYHPQNVFCFAIDANsSAEFQRKMKkl------eQCLPNVVVLPvTESYDSKGHNINLA 203 Caenorhabditis elegans
3OTK_D 159 DLNCMKDLYRmNANWKYLINLSGMDFPIKTNLEIVRKLKCStgENN-LETEKMPPNKe--ERWKKryavvdgKLTNTGIV 235 house mouse
Q9LR71 183 TLQAVSILLReSLHWDWFLNLSASDYPLVTQDDLLYVFSNLsrNVNfIENMQLTGWKl-nQRAKSiiv--dpALYLSKKS 259 thale cress
Q9LFQ0 168 TLHAAAILLReGGDWDWFINLSASDYPLVTQDDLLHTFSYLprDLNfIDHTSNIGWKe-sHRAKPiii--dpGLYMSKKA 244 thale cress
Q9SS69 134 TLHAMALLLRcC-RWDWFINLSASDYPLVTQDDLIYAFSELprDLNfIQHTSRLGWKm-nKRGKPiii--dpGLYSLNKS 209 thale cress
Q6DBE8 163 TLHACAILLKrTPDWDWFINLSASDYPLVTQDDLIHTFSTLdrNLNfIEHTSSLGWKy-kKRAMPlii--dpGLYMLNKS 239 thale cress
Q9C9A1 129 TLHAVSILLKlDPTWNWFIELSALDYPLITQDDLSHVFASVnrSLNfIDHTSDLAWKe-sQRIKPivv--dpALYLARRT 205 thale cress
Q9LIQ3 149 TLHGASILLRlSGTWDWFVSISVDDYPLVTQDELLHIMSHLpkDLNfVNHTSYIGWKe-sRKLKPviv--dpGLYLVEKT 225 thale cress
O76634 235 HYNCLRVLINkP-GWNYAILLQNHDVIVKSVYEIEQIYDWLggANDiEITPEAGRVDnkkFKWDPvsl--kmFRNETGID 311 Caenorhabditis elegans
O02312 545 HNKCLKALLDiP-GWNYALLLQNHDLIMKSVYEMEQIFEWLggANDiFVTHEIGRVDvkkLKWDPmsl--klFINETEMD 621 Caenorhabditis elegans
O16776 204 HYNCMKKLESlR-GWGYLMLLQNHDVITKSVYELDRIFELLggVNDvFMSREIPERRkkhLKWDLksl--klFRNDSKNS 280 Caenorhabditis elegans
3OTK_D 236 kapp-------plktPLFSGSAYFVVTREYVGYVL--ENENIQKLMEWAQDTYSPDEFLWATIqripevpgsFPSSnKYD 306 house mouse
Q9LR71 260 diawttqrrslpnsfRLFTGSAWIMLTRSFLEYCIwgWDNFPRTILMYYTNFVSSPEGYFHTV---------ICNSkEFI 330 thale cress
Q9LFQ0 245 dvfwvsqkrsmptafKLFTGSAWMMLSRPFVDYFIwgWDNLPRIVLMYYANFLSSPEGYFHTV---------ICNArEFT 315 thale cress
Q9SS69 210 eiwwvsnqrslptsfKLFTGSAWTFLSRPFAEYCIigYDNLPRTLLLYYTNFVSSPEGYFQTL---------ICNSdEFK 280 thale cress
Q6DBE8 240 nvllvrpnrslpsafKLF--TAWMALSHAFVEYIIygWDNLPRTLLMYYTNFVSSPEGYFHTV---------ICNVpEFS 308 thale cress
Q9C9A1 206 qlftatekrptpdafKVFTGSPWIVLSRPFLEYCIfgWDNLPRILLMYFNNVILSEECYFHTV---------ICNApEFS 276 thale cress
Q9LIQ3 226 dmffasqkrelpkafKLFSGPSFSILSRNFMEHCVlgTDNFPRTLLMYLSNTPDSLSNYFPTI---------LCNTdTFK 296 thale cress
O76634 312 knvl-------ttsmKFAKGAVQGSLSRGAVDWMVrtVDLSTYINQWNE-GSSGVDEQFIQSFqvs----adLGMPgHFT 379 Caenorhabditis elegans
O02312 622 klll-------ttpmKIVKGWVHCSLSRASVEWMFqkLDPSIFMHQLNQ-GRYGVDEQYFPILqan----aeFGMPgHFT 689 Caenorhabditis elegans
O16776 281 dy-----------elEISSGSVHSSLSRAAVKWLVeeVDLSIFIDQWNQ-TDYGADEQFISTFqms----pdLKMPgHFT 344 Caenorhabditis elegans
3OTK_D 307 LSDMNAIA------RFVKWQyfegdvsnGAPYPPCSGVhvrsVCVFGAGDLSWML 355 house mouse
Q9LR71 331 NTAIGHDL------HYIAWD-----------SPPKQH-----PRSLSLKDFDNMV 363 thale cress
Q9LFQ0 316 NTTVNSDL------HFISWD-----------NPPKQH-----PHHLTLDDFQRMV 348 thale cress
Q9SS69 281 NTTVNHDL------HYIAWD-----------NPPKQH-----PKILGTRDYRKMV 313 thale cress
Q6DBE8 309 KTAVNHDL------HYIAWD-----------KPPRQH-----PRMLSQRDMGKMi 341 thale cress
Q9C9A1 277 NTTVNGDL------RYMIWD-----------SPPKME-----PHFLTISDFDQMA 309 thale cress
Q9LIQ3 297 KTIMNNNL------LYLASN-----------DTSKER-----YHQLDHKEFTEMV 329 thale cress
O76634 380 DECLKQKRntdfvsRMSQWMyg-----sAHKCGSKTVRh--aICLLGIEDLRTVA 427 Caenorhabditis elegans
O02312 690 DECLQQGKttefitRIALWVp-------ESKCDTNMTRh--aVCIIGLEHFQAVA 735 Caenorhabditis elegans
O16776 345 NECIHNDTaivtisRLARWVpiy--ldrAAHCATGTVRh--dICIFGIEDFRAIS 395 Caenorhabditis elegans
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