1E0G,4A1K


Conserved Protein Domain Family
LysM
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pfam01476: LysM (this model, PSSM-Id:307567 is obsolete and has been replaced by 396179)
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LysM domain
The LysM (lysin motif) domain is about 40 residues long. It is found in a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. The structure of this domain is known.
Links
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Statistics
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PSSM-Id: 307567
Aligned: 156 rows
Threshold Bit Score: 32.365
Created: 25-Jul-2016
Updated: 4-Aug-2016
Structure
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Program:
Drawing:
Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
1E0G_A    5 YRVRKGDSLSSIAKRHGVNIKDVMRWN---SDTAnLQPGDKLTLF 46   Escherichia coli
O16237  760 IEVIKGDTCWFLENAFKTNQTEMERANegvKCDN-LPIGRMMCVW 803  Caenorhabditis elegans
O16237  548 TEVKEGDTCFKIWSAHKITEQQFMEMNrglDCNR-LEVGKEVCIV 591  Caenorhabditis elegans
O16237  402 VKINPGDTCFNIWTSQRMTQQQFMDLNkrlDCDK-LEVGKEVCVA 445  Caenorhabditis elegans
O16237  208 LKIKEGDTCYNIWTSQKISEQEFMELNkglDCDK-LEIGKEVCVT 251  Caenorhabditis elegans
O16237  335 ITVKPGDTCFSIWTSQKMTQQQFMDINpelDCDK-LEIGKEVCVT 378  Caenorhabditis elegans
Q94298  118 IHVKEGDTCYTIWTSQHLTEKQFMDMNeelNCGM-LEIGNEVCVD 161  Caenorhabditis elegans
O16237  467 VQINPGDTCFKIWSAQKLTEQQFMELNkglDCDR-LEVGKEVCIA 510  Caenorhabditis elegans
O16237  711 ATITPGNTCFNISVAYGIN---LTDLQktyDCKA-LEVGDTICVS 751  Caenorhabditis elegans
Q94298  187 ATVTPGSSCYTISASYGLN---LAELQttyNCDA-LQVDDTICVS 227  Caenorhabditis elegans
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