Conserved Protein Domain Family
HCO3_cotransp

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pfam00955: HCO3_cotransp (this model, PSSM-Id:307207 is obsolete and has been replaced by 460009)
HCO3- transporter family
This family contains Band 3 anion exchange proteins that exchange CL-/HCO3-. This family also includes cotransporters of Na+/HCO3-.
Statistics
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PSSM-Id: 307207
Aligned: 81 rows
Threshold Bit Score: 435.397
Created: 14-Jul-2016
Updated: 4-Aug-2016
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q16S12        487 GRLFGGLVNDLKRKKPFYLSDFKDGLS------LQCVASWIFLYFACLSPIITFGGLLGSAT-----GNNI-AAMESLVS 554  yellow fever ...
GAA52766      373 vcFGKGLYQDLRNRLPHYWSDYSEGILgkn-tlRKTISGTLFLYFACLLPTIAFGVLNFANT-----NGQI-DVTQMIIS 445  Clonorchis si...
XP_011415674  364 cSLFRGIREDLRRRIPVYVSDFKDGVVgnk-siQKTISTTFFLYFACLMPSIAFGVLNANNT-----KGQL-NVEKVLYS 436  Pacific oyster
XP_009022983  214 hwmgSGLMEDWKKRAPHYLADYTDGFCgqn-tlHKTLSTTFFLYFACILPAIALGVLYYNNTsgpsgEGQI-DVRKVIYS 291  Helobdella ro...
EFX82307      152 GQFGQGIREDLCRRLPHYISDYVDGVVgkk-tpQKVLSTTFFLYFACLLPAIAFGVLNDHNT-----HGKI-GVKKVIMG 224  common water ...
EFX89365      258 crFGQGIREDLSRRLPHYISDYKDGLTgvk-tpQKVLSTTLFLYFACILPAIAFGVLNDHNT-----HGKI-DVKKVIIG 330  common water ...
XP_015782769  629 cRIAQGLCEDLRRRLSHYISDYIDGVVghq-tiHKTISTIFFLYFACLLPTIAFGVLNDNNT-----NGKIgDIRKAIIG 702  two-spotted s...
XP_003113684  415 wyPFRGLKDEFKRRLAIYPSDYLDGIRghk-tvQKLFSTVVFLYFACLLPAIAFGVLNDDNT-----KGAI-NVRKVIIA 487  Caenorhabditi...
XP_015787296  223 ftfCKGIAENIVRRVKYYPSDFVDGLKgpn-tfRKTLATILFLYFACILPCVAFGVLVDKTT-----GGLI-DARRAIIG 295  two-spotted s...
XP_013126765  300 frfgKGVYDDLRRRLPLYPSDFTDGIIgndrslLKYTTTAIFLYIAILLPAIAFGSLNDEST-----RGEI-DVQKTIVG 373  Nile tilapia
Q16S12        555 GFVCGIGYGLFSGQPLTILGSTGPVLVFETIVYDFCMRVGWDYLTFRFWIGTWVTIILVILVAIDASALVCYITRFTEEN 634  yellow fever ...
GAA52766      446 QTIGGLCNGFFGGQPLIVLLSTAPLALYTKIVYTICESFGLNFTAMYGCVGLFNSLFLFGFSVTGLSSLMRWSTRSTEEI 525  Clonorchis si...
XP_011415674  437 QTFGGLVFAFFGGTPHIVLLTTAPLALYTKIIYSICQDFDIDFPAMYACVGLWNSFFLFLYSAFDLSVLMKWSTRSSEEI 516  Pacific oyster
XP_009022983  292 QTISGLTFAVFGGQPMVILLTTAPLAIYTKVIFNICEDLKLDFAGMFACTGLWNSFFLLIYAFTDASKLMRWCTRSTEEI 371  Helobdella ro...
EFX82307      225 QTIGGLFFAIFGGQPLLILLTTAPLALYIKVISSICDDFQLDFFAMYGCVGLWCAFFLLIFSLFNVSRLMHWCTRSTEEI 304  common water ...
EFX89365      331 QTIGGLFFFVFGGQPLLILLTTAPLSLYIKVIYSICEDFQLDFYAMYGCVGLWSSFFLVLYSLFDVSRLMRWSTRSTEEI 410  common water ...
XP_015782769  703 QTVGGLSFGFFGGQPLVIIMTTAPLCLYIKVIYGICEGFGLNFHAMYACVGLWNTFFLVFYAVFDVSRLMKWCTRSTEEI 782  two-spotted s...
XP_003113684  488 QAIGGIFFSLFGGQPMIILLTTVPLAIYIKVIFKISQELGYDFLAMYACVGLFCQMFLILYSATELCSLMKFATRSAEEM 567  Caenorhabditi...
XP_015787296  296 QAIGGLFFALFSGQPLVIIATTAPLCLFTKVVYEIASDFNVDFYSMFACVGLWNSFFVILYALFDVSVVMKWCTRNTEEI 375  two-spotted s...
XP_013126765  374 QSIGGVIYALFAGSPLVIPLTTAPLAIFISVIRGICDDYDLDFDAFYACIGLWNSLFLILGGLFNVSLLMKLFKRSTEEV 453  Nile tilapia
Q16S12        635 FACLIAFIFIYKAVENVLHI-----------------Gkdyplntagskydcsc----------lppgdqplntdivheW 687  yellow fever ...
GAA52766      526 FALFVSVAFIMGAVKDCYKT-----------------Fqkyyvcqtptqimeanqti---agnrtikniigftgnsaehL 585  Clonorchis si...
XP_011415674  517 FALFISIAFCVDAFKDAVSN-----------------Faahynipacsmtttansavn---------------------- 557  Pacific oyster
XP_009022983  372 FALFISLALAVDAFRNVFYD-----------------Frinyhspacyknqsips-------spslsssssssssstalL 427  Helobdella ro...
EFX82307      305 FGLFISVAFCVDACRDTAKN-----------------FqtnfyssqcqgenaitnitkslsssltfyswndtrandssdA 367  common water ...
EFX89365      411 FALFISIAFCVDAFRDTVKN-----------------Fqenynapsckgdpaslavnv--sskanrvdtptaannsvvaY 471  common water ...
XP_015782769  783 FALFISIAFVVDAFRDVYKN-----------------Fnknyyspkclepkqd------------fislltnnftnetsE 833  two-spotted s...
XP_003113684  568 FSLFIAIAFTVESIRAIHNSktffkcsrlftfykfpgFkknyndcdtsaismkaa--------rtaldafrngttntdsI 639  Caenorhabditi...
XP_015787296  376 FAIFIFFAFSVDALKDVVSN-----------------Fkeyypgfgctkaifglvng----tnqiflsgnskeingtiiI 434  two-spotted s...
XP_013126765  454 IALFISIAFVGDAVKGTIKI-----------------Fhhyyhgpiltttnktlv-------lqqineildsaknktetI 509  Nile tilapia
Q16S12        688 AQ-YDKKtcallngTLTGYDCa---KPEYIS--DVFLMSIILFIGTYIISVILKDFKNALFFPSNIRQVVSDFAVIIAIF 761  yellow fever ...
GAA52766      586 DEnLSKEag--------------flLESSSCnkEVALLYLLLLLGTVWLSLYLYNFTKTPFLTAGKREILTDFALPIAVL 651  Clonorchis si...
XP_011415674  558 -------ysitsnltnsvasvvnstaPPSGCerDVSLLYLLLLLGTLWLGVTLYNFTMTPYLNAGKRELLADYSLPVAVV 630  Pacific oyster
XP_009022983  428 NNiEAGGkl---------------lAYASECsrENSLLYLLLMLGTAWLGLSLYNFTKTPFLNASKRELMADCALPVSVL 492  Helobdella ro...
EFX82307      368 IAyPNDE------------------PMGVECnqASSVLFLLLMLGTVWLGVSIFNFKKTPFLSAGKREILADYALPIAVV 429  common water ...
EFX89365      472 LLsQGNAs----------------vSEIVECnrASSLLFLLLMFGTVWIGVSLYNFNKTPYLQAGKREALADYSLPVAVI 535  common water ...
XP_015782769  834 TIdISDG----------------------ECrrDATLLFLLLMLGTVWVAVSLYNFNKTPYLQASKRELLADYALPCAVI 891  two-spotted s...
XP_003113684  640 VGnITSSms--------------igDTGSLCrrDTSILYMLLMFGTLWLGLFLYNFRKTPYLTRSRREWLADYALPASVL 705  Caenorhabditi...
XP_015787296  435 NStESYSli---------------aEAFKFCqpQSCLLFILLMLGTLWLALSLYEFNKTPFLGPTNREILSDYALPIAVV 499  two-spotted s...
XP_013126765  510 LEhHSETgmm--sgHAEGHESiflpESLVLCtrERPILCLLLMLGTLWLGYTLYLIKRSPYLNDKIREVVSDCALPVSVL 587  Nile tilapia
Q16S12        762 SMSILDY--LTNVPTPKLEVPRefkptIPDR-GWLVQPf-hEKNPIWSPVLAVLPALLGTILIFMDQQITAVIINRKEHK 837  yellow fever ...
GAA52766      652 VMSTIGSllSGNISLEPYLHSP-------RDlQLSLTPl--TNLDWRAVLGALGLALPLSMLFYMEQNIASAIVNSPANR 722  Clonorchis si...
XP_011415674  631 IMSFFGSyiFRDVQLDSSFTPR-----ELSLeVFKVVPf--HNLSVGAVFGAMGLGFCLSLLFFMDQNISAALVNAQQNK 703  Pacific oyster
XP_009022983  493 LMSFFGSylFRDVKLKKFKTID--------GnIFTPAPl--SKLEWPAILGGMGLGFCLSLLFFMDHYIAGALVNSTDNR 562  Helobdella ro...
EFX82307      430 TMSFVGSffFREVKAEPFRYDD-------SEnVFTVTPl--ERLPGLAIAGAMGLGFALSLLILMDQNISSAMVNTPLNN 500  common water ...
EFX89365      536 TLSFVGSylFQDVTVERFRYDD--------KnVFMVAPl--ERLSWLAVLGAMGMGFSLSLLFFMDQNITSAMVNNPCNK 605  common water ...
XP_015782769  892 FLSFVGSyvFKDIPVETFRYSN----------TFEIGRahiEELPLSAAFAAMGLGFSLSLLFFMDQNIAAAMVNNPCNK 961  two-spotted s...
XP_003113684  706 IMSFTGSyaFSDIEKDRFNLRF-------EFpLIQMADi--FSLPPSGYFVCLLLGFSLSFLFFIDQNITSAIVNNTQNK 776  Caenorhabditi...
XP_015787296  500 VFSAIGSflFSAIEIESFKFSD--------SfTFKMASf--DSLTPASIAVAAGLGFALSLLFFMDQNISAALVNTPYNN 569  two-spotted s...
XP_013126765  588 ILSFIGSylFIDIQLPVFSVHD--------GpIFKFPPf--EKLSGMNALSAVGLGFLLALLIFIDQNIVISLTHVPEHK 657  Nile tilapia
Q16S12        838 LKKGCGYHLDLFVLALLIQLCSLMGLPWFVAATVLSINHVNSLKQESETAAPG--EKPQFLGVREQRVTHILIFLTIGCS 915  yellow fever ...
GAA52766      723 LRKSPAPHWDLMVVALINMVLSLFCLPWVHAALPHSPLHIRALADIEERIDMGqhIRQTIVRVRETRLTTIISHIFIGLS 802  Clonorchis si...
XP_011415674  704 LKKGTAYHWDLLVCGVINAVLSLLAFPWVHAALPHSPLHVRALADVEERVDQGh-IYQIIVRVRETRLTAIFSHILIGLS 782  Pacific oyster
XP_009022983  563 LKKGSAYHWDLMIIGLLNAFLSFFGLPLVHGALPHSPLHVRAMADVEDRVYQGh-VYLKIIKARETRVTGICSHILIGLS 641  Helobdella ro...
EFX82307      501 LKKGPAYHWDLFVMAILTAALSAVGLPWMHALVPHSPLHARALADVKERVHQGh-VYQIIVRVRETRLTVLFSHILIGLS 579  common water ...
EFX89365      606 LKKGPAYHWDLFVVALVTAFLSLFGLPWMHATLPHSPLHVRGLADVEERVDQGh-VYEIIVKVRETRLTGMISHFFIGLS 684  common water ...
XP_015782769  962 LKKGCAYHLDLFVVGVLNGFLSLYGFPWMHGVLPHSPLHVRSLADVEERVDGGh-VYEIIVKVRETRITSIVSHILIGLS 1040 two-spotted s...
XP_003113684  777 LKKGTSHNLDLFVVALLNMFLSVFGLPWMHGALPHSPLHLRALADVEERVSQGh-VHEVIMNVRETRLASLIAHVMILVS 855  Caenorhabditi...
XP_015787296  570 LKKGSGYHLDLLIVGILNAFTALTGLPWMHGILPHSPLHARSLADIEERVENGc-VKQVVVYVRETRITGIIAHILIGLS 648  two-spotted s...
XP_013126765  658 LLKGTAFHWDLMLTGFINILMSCLGLPWMHAAFPHSSLHARQLAKVEQQVENGh-LYTTIVSVKETRLTSLVANILIGLS 736  Nile tilapia
Q16S12        916 VL--LTPLLSHIPMPVLYGVFLYMGAASLKGLQFFDRLMIMLMPIKYQPDYMFLRQVPIRRVHLFTLI 981  yellow fever mosquito
GAA52766      803 LLm-IPIPLCYIPPAVLMGLFVYMAVTAVYSNQLFERLLLFITEQSAYPPSHYIRRVPQRKLHLFTII 869  Clonorchis sinensis
XP_011415674  783 LL--ILNYLAYIPTPVLYGLFLYVGVTALYGNQLFERIMLLITEQSAYPPNHYIRRVPQRTIHLFTVl 848  Pacific oyster
XP_009022983  642 LF--YIEELKKIPRPVLDGLFLYLAITALHSNQLFERIMLMFTEQAAYPPNHYIRTVPQRKVHLFTLl 707  Helobdella robusta
EFX82307      580 IMl-LPYPLAYIPPAVLNGLFLYVAVTGLGGNQMFERISLFFTEQSAYPPNHYIRRVPQRKIHQFTgc 646  common water flea
EFX89365      685 LFl-LPYPLAYIPTAVLDGLFLYMAVTALNGNQMFERITLLFMEQAAYPPNHYIRRVPQRKIHQFTgc 751  common water flea
XP_015782769 1041 VFl-LPYPLAYIPTAVLDGLFLYMAITALSGSQMFERITLLFMEQAAYPPNHYIRRCPQRKIHLFTFc 1107 two-spotted spider mite
XP_003113684  856 MFflIPYPLQLIPTSVLHGLFLYMALTSLSGNEMFERLLLLITEQQAYPPTHYIRKVPQRKVHLFTAc 923  Caenorhabditis remanei
XP_015787296  649 LYl-IPYPLAYIPVPVLDGLFLYCAFASLRGNSFYERFLLLITEQNSYPPNHYIRRSPQKYIHYFTGI 715  two-spotted spider mite
XP_013126765  737 MFm-LPIPLQWIPKPVLYGLFLYIAATSLDGNQMVDRMTLLLKEQTSYPPTHYIRRVPQRKVHYFTgl 803  Nile tilapia
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