Conserved Protein Domain Family
Tetraspannin

?
pfam00335: Tetraspannin (this model, PSSM-Id:306775 is obsolete and has been replaced by 459767)
Tetraspanin family
Statistics
?
PSSM-Id: 306775
Aligned: 123 rows
Threshold Bit Score: 48.9716
Created: 11-Jul-2016
Updated: 4-Aug-2016
Structure
?
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
P52205        17 LAQGLWLLSWL-LVLVGGLTLLC-------Sghl-------lvqLWHLGTFLAPSCPFSALPQVALAASA--VALGTGLV 79  cattle
Q96QS1        10 AKCQMLVTCFF-ILLLGLSVATMvtltyfgahf--avirrasleKNPYQAVHQWAFSAGLSLVGLLTLGA--VLSAAA-- 82  human
A0CWV3         5 VKKVVGFGAFL-IILIGLALLGF-------Gvyvly---kqvglNYADLYFNTASWLKTLSEYGLLILGA--VILITGIA 71  Paramecium tetr...
Q54F08        17 VRGPFIILNSIiFSLSFILLCST-------Giiiyylne-------------yylvkdlTIPLGSFILSA--YMVITTIV 74  Dictyostelium d...
Q55CV5        15 LKVPLIILNII-LWILGLVLVIV-------GgicvsflsnfkdfTKASDAKSALSNLTTSIPAGVLVIGI--LFVIFTVV 84  Dictyostelium d...
Q55CV4        12 LKVPLIILNVI-LWLLGLVLVII-------GgicvgffsrfkelQEVGGVSESIKSISVSLPAGVLSIGI--FFMVLTVA 81  Dictyostelium d...
Q55CW7        15 LKVPLIAFNTI-LWVLGLVLVII-------GsigvsffsnfkdfTKVSKASAALSNLTTGAPAGVLVIGI--FFVILTVI 84  Dictyostelium d...
XP_001330532   8 ARTIIGLVNLIiLIVMAVILYFSwdqikqiK----------------------IDEIKSSKKVLIFVIVVvaIIAITCII 65  Trichomonas vag...
XP_001329192   8 AVALIGVINLViLVVMGVVAYFCldiikqvT-----------------------ISEVKSSKTFLFSAAVigVIALTCII 64  Trichomonas vag...
XP_001326883   8 LRWVIIIINIL-IVIAAVIACAVvytr--------------igkTSGTTEYYKLFKDSTALYPFFAILAVcaAVCIIGVF 72  Trichomonas vag...
P52205        80 GsgaSRAsLDAEQYppwrGVLGPLLVAGTAGGGGLLVLALgLALALPGT------------------------------- 128 cattle
Q96QS1        83 --------TVREAQ----GLMAGGFLCFSLAFCAQVQVVF-WRLHSPTQ------------------------------- 118 human
A0CWV3        72 G---AKG-SSQKKTscrgCLLLTYQIGAILFFVLCTGLAI-GTLIYSSDlfgqectnkdyfklvdtqiqqaeqifcssyc 146 Paramecium tetr...
Q54F08        75 G---GIA-IWKKKL----GLHLTFMVFLVVLIVCLVGVSAkMIVDSGNPe------------------------------ 116 Dictyostelium d...
Q55CV5        85 G---CFV-AYKEKL----VGLVIYCAVMLILLVILIGVGGkAITLHNDD------------------------------- 125 Dictyostelium d...
Q55CV4        82 G---CIV-AYKEKM----VGLVFYTILMLVLLVVLIGIGGeALTYHNAD------------------------------- 122 Dictyostelium d...
Q55CW7        85 G---CFV-AGKEKL----VGLVIYTMLMLIILVALIGVGGkALTLHNDD------------------------------- 125 Dictyostelium d...
XP_001330532  66 G---FFL-LCCDSK----CFRMTYAILYFIIVIAEIV----LVYFTVKAfpkiiddte---------------------- 111 Trichomonas vag...
XP_001329192  65 G---FFMlCCYKNQ----CFRTTYAVLYFIIVVAECA----LLYFIYKTyptllhdld---------------------- 111 Trichomonas vag...
XP_001326883  73 L-------ICCENR----CWAIFYVVCLFLVLIVEIIILI-CMFLLTNV------------------------------- 109 Trichomonas vag...
P52205       129 ----------------------LDTGLEEGLGSALVHYKDTEvpgrcQAKRLLDELQLRHHCCGrhGYKDWfgiqwvsnr 186 cattle
Q96QS1       119 ----------------------VEDAMLDTYDLVYEQAMKGTs---hVRRQELAAIQDVFLCCG--Kk------------ 159 human
A0CWV3       147 qcyiteetlnrnqtafagknytTDKNVEQKIEKIQECPGYEVna-ysAAVSLLGTAEQLLNCAG--W------------- 210 Paramecium tetr...
Q54F08       117 ---------------------kLQHKIENIWYKVGNYQHHSKh----YHHGIIEIIEKHHRCCG---------------- 155 Dictyostelium d...
Q55CV5       126 ----------------------IINEVGGAWEHVANGTK----------NSTLTRLENFLKCCK---------------- 157 Dictyostelium d...
Q55CV4       123 ----------------------IGIEIEDNWKNISYSNQ----------SVVIKKLEQFFECCCf--------------- 155 Dictyostelium d...
Q55CW7       126 ----------------------VVKQIGNAWEDVSNGPK----------NSTILKLENFLKCCY---------------- 157 Dictyostelium d...
XP_001330532 112 -----------------------------------------dwwnenkgKQSVKDIESDLECCG---FKTAynaaemanc 147 Trichomonas vag...
XP_001329192 112 -----------------------------------------twwdknkgSVEVKKVESSLECCG---FIKEynetemmnc 147 Trichomonas vag...
XP_001326883 110 ----------------------VMDFAETKWNKGVTDKGM---------ENVTRNIEILLECCS---------------- 142 Trichomonas vag...
P52205       187 yldpn------dpdvvdriqsnveGLYLIDGVPFSccnphsprpCLQSqlsdphahplfdpRQPNLNLWSQGCHEVLLGH 260 cattle
Q96QS1       160 -------------------------------sPFSrlgsteadlCQG---------------EEAA---REDCLQGIRSF 190 human
A0CWV3       211 --------------------------------------------CTPApyy-------ifsDINDDSFNGESCFIETKHF 239 Paramecium tetr...
Q54F08       156 ---------------------------------WSkeie--gnyCVH---------------FNRRESGHGYCAPYVEKS 185 Dictyostelium d...
Q55CV5       158 ---------------------------------WSnvsidssdlCPKD--------------GDKIKYEGHYCGEALSDQ 190 Dictyostelium d...
Q55CV4       156 --------------------------------dESdlklnctalCPQD-------------DQKNILYNGTFCYDVIFGA 190 Dictyostelium d...
Q55CW7       158 ---------------------------------WNstssrnpllCPKD--------------SKGIPKYTDTCDSVISSK 190 Dictyostelium d...
XP_001330532 148 gyqqnntsnstdnnitdtnstennTTGN-----------------------------------------VQTCYNKIDEN 186 Trichomonas vag...
XP_001329192 148 gytsnssstdtnssenktanaetnTTETNSTDSTI-----------------------------------ETCYNKVNDK 192 Trichomonas vag...
XP_001326883 143 ---------------------------------FNqptvsetvrCLADtssp------ynkETDVAKASTTGCYDAIKGK 183 Trichomonas vag...
P52205       261 LQGLASTLGNMLAVTFL-LQ-TLVLLGLRYLQ 290 cattle
Q96QS1       191 LRTHQQVA-SSLTSIGLaLTvSALLFSSFLWF 221 human
A0CWV3       240 VESSGKTLGYVLLGLGIyf-gINVLFVLLICC 270 Paramecium tetraurelia
Q54F08       186 VESILKYLGYYGIVLSV-IElILLILSGFFLL 216 Dictyostelium discoideum
Q55CV5       191 FSSKIYAVGAAGLAIGI-IElVAILFSLFLII 221 Dictyostelium discoideum
Q55CV4       191 VNSKLYLVGSAGVAIGV-IElVSLMFALFLIV 221 Dictyostelium discoideum
Q55CW7       191 ISSNLYLVGAAAVSIGV-IEfICMLFALFLII 221 Dictyostelium discoideum
XP_001330532 187 LNKSKKGLKIARIVVIV-VQaLLLIYSIWYGC 217 Trichomonas vaginalis G3
XP_001329192 193 LTKSKKGLMIAGIGIAA-VQiILLIYSLWFGC 223 Trichomonas vaginalis G3
XP_001326883 184 VKKNMYGLAAAAIVIIV-FElALIVISCMYAC 214 Trichomonas vaginalis G3
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap