Conserved Protein Domain Family
NKAP

?
pfam15692: NKAP (this model, PSSM-Id:292320 is obsolete and has been replaced by 464805)
NF-kappa-B-activating protein
NKAP is a family of eukaryotic proteins that interacts with NF-kappa-B. It is a nuclear regulator of TNF- and IL-1-induced NF-kappa-B activation. NKAP does not interact with RIP in mammalian cells family is often found in association with pfam06047.
Statistics
?
PSSM-Id: 292320
Aligned: 47 rows
Threshold Bit Score: 37.8515
Created: 29-Jun-2015
Updated: 5-Aug-2015
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Q5SZT7       113 EKEESYRQRRLKERERigelGAPEVW---GLSPKIPE-------P--------D--S---DEHTPAED-E---VKnqksS 165 house mouse
KFP79700      66 LLRARSWNKKLYECEA----NMPDRWghsGYKELYPEefd--tdS--------D--QqegDEQNAVNGkK---KShlgkH 126 Apaloderma vitt...
XP_003229583  87 LRHARYWNKKLYEYEA----NMPDRWghsGYRELYPEefd--tdS--------DgeQ---NEQNSVNGkR---KRhlgqQ 146 green anole
XP_007494895  87 LLRTRSWNKRLYNYEA----NMPDRWghsGYKELYPEef------------dtD--S---DQQDAINGrK---TPpqekS 142 gray short-tail...
CAJ81277     106 ALSIRAWNKKYSECEA----SIPDRWghsGYKELYPEefdtdsgE--------E--K---NPKKKTNGqE---KTrrkeQ 165 western clawed ...
XP_011406027  80 ETSSTYWTRQLMKVEE----NDPDRWghsGYKELYPEef---------------isT---DEERGGKRkR---ERetkrK 134 Amphimedon quee...
XP_009010735  55 SAYNNVWLREFDRLES----SMADKWghtGYKEMHPEdfq--psPspspdqndY--N---DTRRHSGRrN---NTeccsR 120 Helobdella robusta
XP_001625923  69 gERNTYWMNQLTEFES----SCTDRWghsGYKELYPEefa-sdfA--------D--S---DDDSEDEKkK---KKntskK 127 starlet sea ane...
CCD74603      94 QNAKEFW-RTLARRHC-----DTGRWghdGWDELQKEgpi--pfK--------R--S---ESIDDMKSkS---VTpsitP 149 Schistosoma man...
XP_006972409  87 fLKAKSWNKKLYDYES----NMPDRWghsGYKELYPEefe-------------tdsS---DQQDITNGkKtspQVk---A 143 prairie deer mouse
Q5SZT7       166 SSD---FTN 171 house mouse
KFP79700     127 TAR---ESH 132 Apaloderma vittatum
XP_003229583 147 SSL---ELP 152 green anole
XP_007494895 143 STH---Esh 148 gray short-tailed opossum
CAJ81277     166 REQ---ESH 171 western clawed frog
XP_011406027 135 RPS---TRE 140 Amphimedon queenslandica
XP_009010735 121 DNG---DIE 126 Helobdella robusta
XP_001625923 128 RKK---SSS 133 starlet sea anemone
CCD74603     150 KLPyqhTVD 158 Schistosoma mansoni
XP_006972409 144 SAH---Esr 149 prairie deer mouse
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap