Conserved Protein Domain Family
Cnd1

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pfam12717: Cnd1 (this model, PSSM-Id:289487 is obsolete and has been replaced by 463677)
non-SMC mitotic condensation complex subunit 1
The three non-SMC (structural maintenance of chromosomes) subunits of the mitotic condensation complex are Cnd1-3. The whole complex is essential for viability and the condensing of chromosomes in mitosis.
Statistics
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PSSM-Id: 289487
Aligned: 67 rows
Threshold Bit Score: 76.0579
Created: 29-Jun-2015
Updated: 5-Aug-2015
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q9M1J4        980 SEVVRSNCTLSLGDLAVRFPNLLEpwTENMYARLRDASVSVRKNAVLVLSHL--ILNDMMKVKGyiYEMAICIEDDVERI 1057 thale cress
Q10LA0        101 NPLIRALAVRTMG--CIRVDKITEylCDPLQRCLKDDDPYVRKTAAICVAKLydINAELVEDRGflEALKDLISDNNPMV 178  Japanese rice
Q5BYC6        126 NPLIRALAVRTMG--CIRVEKITEylCDPLRKCLSDEDPYVRKTAAVCVAKLhdINAQLVEDRGflELLKDLLCDSNPMV 203  Schistosoma j...
XP_002100977   99 NPLIRALAVRTMG--CIRVDKITEylCEPLRKCLKDEDPYVRKTAAVCVAKLydISATMVEDQGflDQLKDLLSDSNPMV 176  Drosophila ya...
XP_001647471  112 NPLIRCMAIRTMS--MIRVDKILEyiEIPLRKTLQDDNPYVRKTAVICVAKLfqLNKELCIELGvlEDLVSALDDSNPMV 189  Vanderwaltozy...
XP_003075084   98 NPFIRALAVRTMG--CIRVDKIVEylCDPLNLALRDPDPYVRKTAAICVAKLhsINSELVVDRGflQQLKYLSVDENPMV 175  Ostreococcus ...
XP_001416201  101 NPLIRALAVRTMG--CIRVDRIVEylCDPLHLALRDSDPYVRKTAAICVAKLysINRELVIDRGflQQLNGLLLDDNPMV 178  Ostreococcus ...
XP_002507338  102 NPLIRALAVRTMG--CIRVDKITEylCDPLQRALDED-PYVRKTAAICVAKLfdINAELVRDRGflHQLHDLLADSNPMV 178  Micromonas sp...
KFG48804       99 NPLIRALAVRTMG--CIRLEEITEylVEPLRRSCKDPDPYVRKTAAICVAKLfsIRPDMVGEEGfiEELTTMLSDSNPVV 176  Toxoplasma go...
XP_002995296  728 NVKIRANAIISMGDFLLFYNSLVEnnAKLLFNGLTDQEILVRKNALLTIYSL--LKRNIIRLGSnsIYLTNLVFDDNEEI 805  Nosema cerana...
Q9M1J4       1058 SSLAKLFFHELSKK----GS------NPIYNLLPDILGQLS------NRnLERESFCNVMQFLIGSIKKDKQm-EALVEK 1120 thale cress
Q10LA0        179 VANAVAALAEIQDS----ST------RPIFEITSHTLSKLLta---lNE-CTEWGQVFILDSLSRYKAADAReaENIVER 244  Japanese rice
Q5BYC6        204 VANAVASITEILEIttsdSA------KSLLSFNGPVINKLLta---lNE-CTEWGQVFILDAIADYTPADDResQSIIER 273  Schistosoma j...
XP_002100977  177 VANAVAALSEINEAs--qSG------QPLVEMNSVTINKLLta---lNE-CTEWGQVFILDSLANYSPKDEReaQSICER 244  Drosophila ya...
XP_001647471  190 VANATAALTEISCM----DPtavsliDLISSHFSQYLSVLNe--------CTEWARITILTALTEYDAKDSIeaQNIVDR 257  Vanderwaltozy...
XP_003075084  176 VANSISALVEIQNG------------ESSEIIDSQCLSAVIas---lDV-CTEWGQVAILNCLAAYKCVDGSeaKKVIEC 239  Ostreococcus ...
XP_001416201  179 MANSIAALVEIQKGs---CA------QIIDSSLLSRVFTs------lEA-CTEWGKVTILDCLAAYESTSATeaEHILES 242  Ostreococcus ...
XP_002507338  179 VANAVAALSEVQHSs--sSG------IENFTLASDTVHKLLaa---lNE-CTEWGQVFILDSISSYSPQNERqaESIIER 246  Micromonas sp...
KFG48804      177 VANAVAALSEISENs---GR------NYMKNILNAKESNVNkllaalNE-CTEWGQVFILDALAQFEPETPRaaESVLDR 246  Toxoplasma go...
XP_002995296  806 KSISRNIIYGLSE-----NE------NYITTI---VYEKLS---------HSDVDYTKYIEFFIPLLKDKSK--ETIFLK 860  Nosema cerana...
Q9M1J4       1121 LCNRFSGVTgmlvlmiypytcfgfnkkyipltstpklaDGKQWEYISYSLSLLT 1174 thale cress
Q10LA0        245 VTPRLQHAN-----------------------------CAVVLSAVKIILLQME 269  Japanese rice
Q5BYC6        274 VSPRLAHAN-----------------------------AAVVLSTVKVIMKMLE 298  Schistosoma japonicum
XP_002100977  245 ITPRLAHAN-----------------------------AAVVLSAVKVLMKLLE 269  Drosophila yakuba
XP_001647471  258 VTAHLQHVN-----------------------------PAVVLATIKVIIKNLN 282  Vanderwaltozyma polyspora DSM 70294
XP_003075084  240 ALPKLQHAN-----------------------------YAVVLACIRLIINHLQ 264  Ostreococcus tauri
XP_001416201  243 ILPKLQHAN-----------------------------YAVVLACIRVILSKLH 267  Ostreococcus lucimarinus CCE9901
XP_002507338  247 VTPRLQHAN-----------------------------CAVVLSAAKVLISQLE 271  Micromonas sp. RCC299
KFG48804      247 VTARLSHAN-----------------------------SAVVLSAIKVVMKLLD 271  Toxoplasma gondii FOU
XP_002995296  861 LLRTAVNKEv----------------------------LKFMFNKFNFVDKFLE 886  Nosema ceranae BRL01
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