Conserved Protein Domain Family
Dmrt1
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pfam12374: Dmrt1 (this model, PSSM-Id:289167 is obsolete and has been replaced by 463555)
Double-sex mab3 related transcription factor 1
This domain family is found in eukaryotes, and is typically between 61 and 73 amino acids in length. The family is found in association with pfam00751. This family is a transcription factor involved in sex determination. The proteins in this family contain a zinc finger-like DNA-binding motif, DM domain.
Links
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Statistics
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PSSM-Id: 289167
Aligned: 19 rows
Threshold Bit Score: 64.3723
Created: 15-Jul-2015
Updated: 5-Aug-2015
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
P85119        86 ELGISHPIPLPiAA-ELLIKREHGGSssCLMLE-SSSTQTTstSTSGSTT-SSEGKMLIQEIPSITSRGHLESTSD 158 western clawed frog
Q801F8        81 ELGICSPEASS-GP-EVMVKNEAGAD--CLFSMeGRSGTPA--VPPNPLS-AAGSCSASSSSPSAAARVYGEEASD 149 Japanese medaka
XP_006627185  87 EMGICSLVPFP-NP-DVVIKNEASGDraCLFSArGKSPPSStsSRATTPP-ATGSRSSQQDSPSAASRGYAEGTSD 159 spotted gar
XP_003216601 105 ELGISHPIPLP-NAtEMYVKKEGSANgsCLLLEsSSPQQSTtaATTVSSA-STEGRMLIQDIPSLASRGHLESTSD 178 green anole
CAG08193      83 ELGIWSLGPLP-GA-GVMVKNEPGAE--CCFTVeGRSQTST--SGPSSAV-ATASRTVPSSQPSAGARAHHEGQSD 151 spotted green puffe...
XP_007257776  88 EMGICTPVNLS-GN-DIVVKNEPSND--FVFPVgTRSPSAT------SPT-ASGSRATLSPGPISSSRGHSDASTD 152 Mexican tetra
AAU11586      76 EMGICSPINLS-GS-DTLVKNEAVGE--NVFTLsSGPPSPAssSATASPT-NLGSRSMLSLSPAMSSRGHTDCTSD 146 zebrafish
NP_001254571  86 ELGICSPVALA-GP-DVTVKNEAAAD--CLFSEeGRSPSPS-----PSLA-VTGGRSASSPSPSAGGRALAEGPSD 151 three-spined stickl...
XP_011614133  82 ELGICSPVPLS-GA-GMMVKNEAGAE--CFFSAeGRNQAATstSSSSVVP-ASR--SVTSSRPSAGARAANDGQSD 150 torafugu
AAR88766      36 ELGISHPVPLPsAP-EPVVKKSSSSSs-CLLQDsSSPAHSTstVAAAAASaPPEGRMLIQDIPSIPSRGHLESTSD 109 chicken
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