4IX7,4X0G


Conserved Protein Domain Family
BEN
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pfam10523: BEN (this model, PSSM-Id:287493 is obsolete and has been replaced by 463133)
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BEN domain
The BEN domain is found in diverse animal proteins such as BANP/SMAR1, NAC1 and the Drosophila mod(mdg4) isoform C, in the chordopoxvirus virosomal protein E5R and in several proteins of polydnaviruses. Computational analysis suggests that the BEN domain mediates protein-DNA and protein-protein interactions during chromatin organization and transcription.
Links
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Statistics
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PSSM-Id: 287493
Aligned: 53 rows
Threshold Bit Score: 33.1291
Created: 26-Jun-2015
Updated: 5-Aug-2015
Structure
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Program:
Drawing:
Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
4IX7_A        29 LATRKLLVTIFDR-------ETLATHSVTGKPSPAFKDqdkPLKRXLDPGKIQDIIFAVTHKCn----------aSEKEV 91  fruit fly
Q08FV7       320 DLTEKIIKKKF---------DYIFKNRMNEKYRFYFD----GNHIGLNQIKIMQIYNKIKLFVdhndde-lvfnsFVYSV 385 Deerpox virus W...
Q9Q8R5       302 DLTEKLIKTTFPE----------VVKSGEGHNYRCYPD---GTHQGLDPERVIDMCYKARVATdsesvv-dvhnaIVETV 367 Myxoma virus
Q9Q940       301 DLTEKLTKAMFPE----------VIKSGMGHTYRCYPD---GTHQGLDLKRVIDLCYKVRVSTdsecdi-dvhnaIVETV 366 Rabbit fibroma ...
P21606       251 ELVEKVLKILFRDlfksgeyKAYRYDDDVE-----------NGFIGLDTLKLNIVHDIVEPCMpvrrp--vakilCKEMV 317 Vaccinia virus WR
XP_007633175 261 DLACRLLVQLFPElfn--nvDFSRGCSACGF----------AAKRKLESLHLQLIRNYVEVYYpsvkdtavwqaeCLPQL 328 Chinese hamster
XP_003769381 273 DLACRLLVQLFPElfs--dnEFNRSCTTCGF----------VNKKKLESLHLQLIRNYVEVCYpsvkntavwqveCLPQV 340 Tasmanian devil
XP_002937205 276 DLACRLLVQLFPElfg--sdGYSRNCSTCGY----------INKTKLESLHLQLIRNYVEVCYpsvkntgiwqveCLPQL 343 western clawed ...
XP_006626096 272 ELACRLLVQLFPElft--veDYNRNCNACGI----------VSKKKLDSLHLQLIRNYVEVCYplvkngsvwqveCLPQI 339 spotted gar
XP_007247594 248 ELGCRLLVQLFPElft--akECAHGCKSCGV----------ANKRTLDSLHLQLIRNYVEVCYplvkngnvwqteCLLQI 315 Mexican tetra

4IX7_A        92 RNAITTKC 99  fruit fly
Q08FV7       386 DMCLSTPR 393 Deerpox virus W-848-83
Q9Q8R5       368 NRFLIRSE 375 Myxoma virus
Q9Q940       367 DRYLIRSE 374 Rabbit fibroma virus
P21606       318 NKYFENPL 325 Vaccinia virus WR
XP_007633175 329 NDFFSRFW 336 Chinese hamster
XP_003769381 341 NDFFNRFW 348 Tasmanian devil
XP_002937205 344 NDFFNQFW 351 western clawed frog
XP_006626096 340 NDFFNRFW 347 spotted gar
XP_007247594 316 NDFFNRFW 323 Mexican tetra
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