Conserved Protein Domain Family
PAM2
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pfam07145: PAM2 (this model, PSSM-Id:284542 is obsolete and has been replaced by 429316)
Ataxin-2 C-terminal region
The PABP-interacting motif PAM2 has been identified in various eukaryotic proteins as an important binding site for pfam00658. It has been found in a wide range of eukaryotic proteins. Strikingly, this motif appears to occur solely outside of globular domains.
Links
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Statistics
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PSSM-Id: 284542
Aligned: 40 rows
Threshold Bit Score: 27.9902
Created: 20-Jul-2016
Updated: 4-Aug-2016
Structure
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Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
Q6K390         2 ERSSQLNPNATPFVPPPR 19  Japanese rice
Q9JM55       128 EIKSSFNPDAQVFVPIGS 145 house mouse
Q4WNU4       577 PSPSKFNVQAKEFVPTVA 594 Aspergillus fumigatus
Q9VJF6        27 EGTVKLNANAQEFVPRYK 44  fruit fly
Q94LD0        31 TPPFRLNVHAPEFVPRSP 48  rice
Q9VJF5        42 PLDRRLNPNAPVFVPDFK 59  fruit fly
Q69UJ1        30 DLLSKLNPMAEEFVPPSL 47  Japanese rice
Q17HU8       128 VEQSTLNPLAAEFVPSVL 145 yellow fever mosquito
Q7RZ42        24 QLPKTLNPLAPEFVPKVQ 41  Neurospora crassa
XP_002281817  31 AASFKFNAQAPEFVPRSH 48  wine grape
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