4CI8


Conserved Protein Domain Family
HELP

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pfam03451: HELP (this model, PSSM-Id:281450 is obsolete and has been replaced by 460922)
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HELP motif
The founding member of the EMAP protein family is the 75 kDa Echinoderm Microtubule-Associated Protein, so-named for its abundance in sea urchin, sand dollar and starfish eggs. The Hydrophobic EMAP-Like Protein (HELP) motif was identified initially in the human EMAP-Like Protein 2 (EML2) and subsequently in the entire EMAP Protein family. The HELP motif is approximately 60-70 amino acids in length and is conserved amongst metazoans. Although the HELP motif is hydrophobic, there is no evidence that EMAP-Like Proteins are membrane-associated. All members of the EMAP-Like Protein family, identified to-date, are constructed with an amino terminal HELP motif followed by a WD domain. In C. elegans, EMAP-Like Protein-1 (ELP-1) is required for touch sensation indicating that ELP-1 may play a role in mechanosensation. The localization of ELP-1 to microtubules and adhesion sites implies that ELP-1 may transmit forces between the body surface and the touch receptor neurons.
Statistics
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PSSM-Id: 281450
Aligned: 55 rows
Threshold Bit Score: 80.6263
Created: 25-Jun-2015
Updated: 5-Aug-2015
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4CI8_A         25 GYVKMFLRGRP--VTMYMPkDqVDSYSLEAKVELPTKRLKLEWVYGYRG-R----DCRNNLYLLPTGETVYFIASVVVLY 97   human
XP_001014470  923 GDQALAVKPYLgqITLSIP-EqYRNIDEKKFNVLPQAQLALNYVFGFKT-KnvndDSRNLLKFLQNGKIVFPAAGVGIVL 1000 Tetrahymena t...
XP_002907416 1588 GDEFMAVKPWI--GAIVAP-TnA----ATPNSREPDLKVELEWVYGYQS-E----LSKQNLVYNTHDEIVYHTAAVGIIY 1655 Phytophthora ...
XP_002946691  244 frgKITYRYCR--KPVFPP-SnWDGTPALRSARKPKPGLKLEFVYGYAGvE----NTASNIFFTGDGRLVYYTAAVGVIY 316  Volvox carter...
XP_002907416  935 GDEFMAVRPWL--GAVVAP-T--KAASMKVDSTSPNTRLELERVHGYQA-Q----TASNNARYDSNGKVVYHTAALGIVF 1004 Phytophthora ...
XP_001010128 1730 GDEFMAVKPWL--GAIKEP-S-YKYFKDKNQFEEPPVTINPYYVFGIRT-K----DQRGNLRYTSSGKIVYNAAALGIVL 1800 Tetrahymena t...
XP_004032384 1485 GDQFMAVKPWL--GAIKEP-T-YKYFKDSKQAEAPPVSIKPQYCYGIRT-K----DQRGNLRFTKSGKLVYNAAALGIVL 1555 Ichthyophthir...
XP_004035187  197 GDEFMAIKPWL--GAIKEP-S-NYYKDPLNQSKEPPIQLQIDYVHGYRS-K----DCRDNIFYLNYGGIVYHAAALGIVL 267  Ichthyophthir...
XP_001014470 1643 GDEFMAVKPWL--GAIKEP-T-TYYKDPLNQSKEPPVSLQLEYVHGYRA-K----DCRDNIRYLKSGNIVYNAAALGIVM 1713 Tetrahymena t...
A0E9H8       1598 GDQFMACKPWM--GAIKEP-TyQYYQSKTDGHKPPKCDMEIEYVHGYRT-K----DMRNNLFFLANGQVLYNAAALGIVL 1669 Paramecium te...
4CI8_A         98 N 98   human
XP_001014470 1001 e 1001 Tetrahymena thermophila SB210
XP_002907416 1656 D 1656 Phytophthora infestans T30-4
XP_002946691  317 D 317  Volvox carteri f. nagariensis
XP_002907416 1005 D 1005 Phytophthora infestans T30-4
XP_001010128 1801 D 1801 Tetrahymena thermophila SB210
XP_004032384 1556 D 1556 Ichthyophthirius multifiliis
XP_004035187  268 D 268  Ichthyophthirius multifiliis
XP_001014470 1714 D 1714 Tetrahymena thermophila SB210
A0E9H8       1670 D 1670 Paramecium tetraurelia
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