Conserved Protein Domain Family
DNase_II

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pfam03265: DNase_II (this model, PSSM-Id:281283 is obsolete and has been replaced by 460868)
Deoxyribonuclease II
Statistics
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PSSM-Id: 281283
Aligned: 109 rows
Threshold Bit Score: 123.898
Created: 12-Jul-2015
Updated: 5-Aug-2015
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
P34508         20 QCKDNNG---------------S-NVDWFVFYKLPhlwnhpdnvpisNGTGFLYFDVNNKnWKLMPQ---GMDVENN-A- 78   Caenorhabditi...
Q55D42         24 KCITTKNvytksqv-fidkdgeK-NVEWWVLEQLS------------QSQGAIYTDNE---LNGANP---VINELAY-Yn 82   Dictyostelium...
Q55D38         24 KCITTKNiykdgqvfgdgvtieK-NVEWWFLEQLG------------HSKGSIYTDNT---LKGGSS---EINEIAN-Yn 83   Dictyostelium...
XP_003378514   30 QCQTHDG---------------NgNVDWAILYKAag---------qnNGK---IITAASAnWQQSPT---VITGAGGnS- 78   Trichinella s...
XP_003381762   39 KCQDLNG---------------AaPADWAILYKAPaq---------nTGK--ALIGGAAAnWQVYPAitgLVDH----S- 87   Trichinella s...
XP_003382286   16 lilwayfpnislatskcqnaaggadadwaILYKAPaqs------ngkVLVEGA-----AAsWAGSPA---AVAADNG-Hs 80   Trichinella s...
AAY32317       22 QCK-EQN---------------N-DVDWFFVYKLP------------GGKSSHHLLPNAAtDWSAAA---NIDDAQQ-P- 67   Trichinella s...
EFA79444      986 SCLSPSG---------------A-AVSWWFARKLPqs------------ssYLYFDSQSSvVQ-YFD---SINSNSS-S- 1031 Polysphondyli...
EFA77037     2658 SCLSTQG---------------A-SVSWWFVRKIP------------QSQSYIYVDSDSQdMK-YLP---SINSTTG-C- 2703 Polysphondyli...
XP_004359946   44 tCKSPTG---------------D-SVQWWFIKKLPy------------SNQYIYIDNDSKtIQ-FQN---DLSDDQS-S- 89   Dictyostelium...
P34508         79 V-----YYTLQ--------------------------QY-Y-NS-N-MNTTF------SYMYND--------EwpD---- 105  Caenorhabditi...
Q55D42         83 IrnpdePNPIT--------------------------ST-YiQ--S-YPNKSgktiynSLTYND--------Qp------ 118  Dictyostelium...
Q55D38         84 IrdpkePNPIT--------------------------ST-YkQ--S-LPNESkkiiynSLTYND--------Qi------ 119  Dictyostelium...
XP_003378514   79 F-----GKALE--------------------------HV-A-VV-D-QSA-K------FVAYNN--------Kp-P---- 103  Trichinella s...
XP_003381762   88 F-----GRAVE--------------------------HV-V-AL-N-ANN-K------FIAYSN--------Vp-P---- 112  Trichinella s...
XP_003382286   81 F-----AKALE--------------------------HV-I-AA-N-ANN-K------FISYNN--------Hp-P---- 105  Trichinella s...
AAY32317       68 I-----HSTMN--------------------------IY-I-ASgN-KPNTN------IVAYSN--------Yp-P---- 94   Trichinella s...
EFA79444     1032 L-----ALTLN--------------------------QI-K-SN-NvQTTNG------YLAYND--------Mp-Wlddl 1062 Polysphondyli...
EFA77037     2704 L-----ARTLN--------------------------QIaI-SS-S-ESSNG------YVVYND--------Hp-Wfddl 2734 Polysphondyli...
XP_004359946   90 L-----ARTLSqlsqqqqqqqlnggggggsdqndnsdYY-Y-YF-Y-NNEFQ------NLNSNDrtnfplpaDk-S---- 149  Dictyostelium...
P34508        106 --------STIWSNSSGHAKGVTVF-D----Q-----------Y------TGFWMIHSIPKFP--------------SKD 141  Caenorhabditi...
Q55D42        119 ----------sNSGNSAHAKGFFIW-N----E-----------E------GGIHVIHSVPNSP---------------ET 151  Dictyostelium...
Q55D38        120 ----------sGGSDSAHAKGFFIW-N----E-----------E------GGIHVIHSVPKSP---------------ET 152  Dictyostelium...
XP_003378514  104 --------NAVGVQTNSNSKGILIM-DpnpaT-----------D------SAAWIIHTVPGFPk-------------ALQ 144  Trichinella s...
XP_003381762  113 --------DLPKVKTKSNSKGV---------T-----------D------AAAWIVHTVPGFPk-------------ALR 145  Trichinella s...
XP_003382286  106 --------DVPKVKTKSSSKGVLMM-Dit-gT-----------D------AAAWIVHTVPGFPk-------------ART 145  Trichinella s...
AAY32317       95 --------HFKFELPMSPGKGVIMAeD----N-----------N------KGFWLVHTAKYFPnl----------alAIG 135  Trichinella s...
EFA79444     1063 sgklaqslTGDVNKYNSLGKGILVS-Q----S-----------KfnisyaPGFHIKHSLEGFPv-------------PLG 1113 Polysphondyli...
EFA77037     2735 sgqlslsiNGYGNLNKSLGKGIFVA-N----Tffn-----atyS------PGFHIKHSMEGFPv-------------PLP 2785 Polysphondyli...
XP_004359946  150 --------TIQPSTVYSSSKGIVIL-N----KpplqnnntnktF------SGAYIVHSLSRFPqltttttnsfktpiTHP 210  Dictyostelium...
P34508        142 MF-------RF--P---------------SN------------------A-----------HYYGQMGICISY-NtvSLA 167  Caenorhabditi...
Q55D42        152 GYkp---lfNF--K---------------ENt----------------lK-----------SQHAQHSICITL-SkeELH 183  Dictyostelium...
Q55D38        153 GYep---lfNY--D---------------KDt----------------lN-----------NQHAQHSICITL-SkeELH 184  Dictyostelium...
XP_003378514  145 AY-------AF--P---------------AE------------------E-----------IAKGHLFVCLTI-KeeQLD 170  Trichinella s...
XP_003381762  146 GY-------VF--P---------------PA------------------E-----------IQKGHLLICLTI-KesQID 171  Trichinella s...
XP_003382286  146 GY-------LF--P---------------PA------------------E-----------VQKGHLLICLTI-KedQID 171  Trichinella s...
AAY32317      136 DL-------FS--N---------------EK------------------T-----------TKEAAAFLCMSY-SdvNLR 161  Trichinella s...
EFA79444     1114 STgaiktpsSY--PdgtwfpndyhlrpteSP------------------D-----------LSFGHSFLCHSF-VdaT-- 1159 Polysphondyli...
EFA77037     2786 NG-------LFktP---------------SShpsswipndyhliqnqgdD-----------YSLGHSFMCHSLiDssDFV 2832 Polysphondyli...
XP_004359946  211 NG-------TW--F---------------PT------------------DyylsplspspsSSYGHSLVCTSF-K--DYE 245  Dictyostelium...
P34508        168 TIAQQLFYYNTFTYQF-NLPqs---faNQFPVLSQLKNK-E-YNK-------------------SppltSTK-----VLK 217  Caenorhabditi...
Q55D42        184 IIPKYIIYGNLNIQTInTVSpgs--gaKRVSSAMFLYSQ-V-LKEevdkkktgvidldvidskiL----ATK-----IPK 250  Dictyostelium...
Q55D38        185 IIPKYIIYSNLNIQTInTVStglgkkaKKVSSAN-LYSE-N-LHTevekispgv--inldvienL----AKE-----IPK 250  Dictyostelium...
XP_003378514  171 VIAHALRIVRPLVYHH-DIPat---evNSRPNLKNLLNGdS-TVL-------------------Ppl-tISN-----DIK 220  Trichinella s...
XP_003381762  172 PIARTLRIATPLIYHS-DIPdt---qmNSRPNLKKLVDG-E-SRF-------------------MppltVSQ-----EIS 221  Trichinella s...
XP_003382286  172 TIALTLRFATPLIYYN-DIPdt---emNSRPNLKKLVSG-E-SRV-------------------Lpp-lAVT-----KDT 220  Trichinella s...
AAY32317      162 AIAKIIDYEQPIVFFA-QKSatv-pafYDSTEIQKLVNG-L-HKY-------------------Qpt-aSASgdgiaTLT 217  Trichinella s...
EFA79444     1160 EIINAIVAMKPFTYAS-Nrf------tANSNMFTPMFQS-TaAVI-------------------Ppf-rSSS-----WLT 1206 Polysphondyli...
EFA77037     2833 NGIQSLK---PFIYSS-N-----------------RFTP-T-STT-------------------Nif-sSLF-----TDS 2864 Polysphondyli...
XP_004359946  246 DVRYQIQSIYPYIYMT-NLnl-----pFKDPLLKSTFNS-L-FYP-------------------Typ-pKSL-----YLK 292  Dictyostelium...
P34508        218 Slg----gQHFRHFAK----TG-E-WGK-DLysdfv------------gptlKSSIKVETWNH------QsgdeYNLPSV 268  Caenorhabditi...
Q55D42        251 TfkeldglMSEYIFDN----KK-NdGDP-DIwng--------------------viYLNKWSQ------L----ADLILN 294  Dictyostelium...
Q55D38        251 TfkkldglMSDYILVK----KK-NdGDP-DIwng--------------------iiYLNKWSQ------L----AKLILN 294  Dictyostelium...
XP_003378514  221 Taas--pgIKATVFSK----GE-K-SGY-EMfkkvl------------srklKKDL--KVWTT------Rd---TKLKGD 268  Trichinella s...
XP_003381762  222 Ten----aQ--------------------EIykril------------vkrlKST--IKVWTT------Rd---NILKSD 254  Trichinella s...
XP_003382286  221 Ttaa-aqsLKVTIYSK----GE-K------------------------------SRYVKVWTA------Rd---KKLKSD 255  Trichinella s...
AAY32317      218 Pp------gTVKIFAS----APvA-YSS-DIylnyi------------vkimQKSFQVYTPGT------Ta---TVLRKS 264  Trichinella s...
EFA79444     1207 Nt-------aFL--------SS-A-FQQ-DIftpvg------------lsplLITMPANFKLPiaataiTe---TKLPSD 1253 Polysphondyli...
EFA77037     2865 Ttn----sFTSKDWSKgyfiSA-G-FRN-DIftptr------------iqplSITLPSKFKIP------Sg---ANAITD 2916 Polysphondyli...
XP_004359946  293 Pd-----aIKLQSLSS----RD-D-NGDrDPnssisitssikwggasiwhssNTINYISIPSK------Yk---NPLPTN 352  Dictyostelium...
P34508        269 --------CD-----------PNH--------VQsTMSAkyirlP---YAIDYSSYEDHSKFVVAYSessskPPipYVCI 318  Caenorhabditi...
Q55D42        295 --------KDitssdtnlkpkETN--------VH-YYKI---------------NESDKGRYFIQTTn----IN----LY 334  Dictyostelium...
Q55D38        295 --------EDitssdltlkpkETN--------VH-YNKI--------------YESKNKGDYFIQTTn----KN----LY 335  Dictyostelium...
XP_003378514  269 --------CRil---------gRN--------IK-LITS-----PisvSGDASTFENDVSQWAVTEPg-------nIFCA 310  Trichinella s...
XP_003381762  255 --------CRkf---------gRN--------IK-LITS-----PisvNGDASQLENDDSHWLVSEPg-------nKFCA 296  Trichinella s...
XP_003382286  256 --------CRis---------gkN--------IR-LVTS-----PisvNGDQSTLENDVSQWLVTETg-------nKFCA 297  Trichinella s...
AAY32317      265 --------CAgt-------lkVEN--------VLgPITV---------RDTQIPIGQDSARWSVPKS-----DSd-FICL 306  Trichinella s...
EFA79444     1254 --------FVsq-------hnI-------------PMQI-----------SQWRASRDHSHIGFNDT---------HLCL 1285 Polysphondyli...
EFA77037     2917 --------VKlpt-----efiIQN--------NI-PTKI-----------SQWKSDIDKSYIAFNDT---------HLCL 2954 Polysphondyli...
XP_004359946  353 ngknstmvSSpi-------thVINsqklpgdlVT-RYRI-----Ds--DKSQWDTSVDKGIFGVSTIq----SLs---CI 410  Dictyostelium...
P34508        319 GDINRqSHQIHRGGGTMCIYDQETY-------------FQFANIISE 352  Caenorhabditis elegans
Q55D42        335 KEYSEkNKEAHKDG----IKFFIVWhfidsskndlpngNNFKTMVHT 377  Dictyostelium discoideum AX4
Q55D38        336 KKYNEkIEETHKEK----IKFFIIWhyidn----fkngNNFKTMVHT 374  Dictyostelium discoideum AX4
XP_003378514  311 IDKPYhRSQRKDPALAVCIDDATIF-------------ARFNDFVTg 344  Trichinella spiralis
XP_003381762  297 VDKPYhKSQAKEPAMAVCIDDATIF-------------TRFNEIAVN 330  Trichinella spiralis
XP_003382286  298 VDKPYqKSQAMEPAMAVCIDDATIS-------------ARFKEIAQN 331  Trichinella spiralis
AAY32317      307 SNTGRtAKDAKYGASVACVLSKEAA-------------DLFRKMITK 340  Trichinella spiralis
EFA79444     1286 GD--YsAKTTIGGGMAVCIKQTVLS-------------DFFITSIFK 1317 Polysphondylium pallidum PN500
EFA77037     2955 GDYSSkTS--FGGGIAVCVINQFSS-------------EFFVESIFK 2986 Polysphondylium pallidum PN500
XP_004359946  411 GDYDQnINSA-NGELMICINNSILS-------------SLLKSMIVN 443  Dictyostelium fasciculatum
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