1CNT


Conserved Protein Domain Family
CNTF

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pfam01110: CNTF (this model, PSSM-Id:279454 is obsolete and has been replaced by 395881)
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Ciliary neurotrophic factor
Statistics
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PSSM-Id: 279454
Aligned: 6 rows
Threshold Bit Score: 269.405
Created: 7-Jul-2015
Updated: 5-Aug-2015
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1CNT_3         1 MAFTEHSPLTPHRRDLCSRSIWLARKIRSDLTALTESYVKHQGLNKNINLDSADGMPVASTDQWSELTEAERLQENLQAY 80  human
Q02011         1 MAAADTPSATLRHHDLCSRGIRLARKMRSDVTDLLDIYVERQGLDASISVAAVDGVPTAAVERWAEQTGTQRLLDNLAAY 80  chicken
XP_003774036   1 MAFPENTPLTPHHRDLCTRSIWLARKIRSDLTSLLESYVEYQGLNKDVDLDSMDGVPTASTDRWSELTEAERLQANLHAY 80  Tasmanian devil
XP_004869796   1 MAFAELSPLTPHRRDLCSRSIWLARKIRSDLTALMDSYVKHQGLSENVSLDAVGGVPAASIAQWSELTEAERLQENLHAY 80  naked mole-rat
XP_003583242   1 MAFAEHSLLPPHRRDLCSRSIWLARKIRSDLTALVDSYMKHQGLNGNMNLDTLEGVPTASSSRWSELTEAERLQENLQAY 80  cattle
XP_004174563   1 MAASESPSAALRRRDLCSRGIRLAGKMRADVVDLLDAYVEQQGLDASASVAAMEGVPLAAVERWDEQTGTQRLLENLAAY 80  zebra finch
1CNT_3        81 RTFHVLLARLLEDQQVHFTPTEGDFHQAIHTLLLQVAAFAYQIEELMILLEYKIPRNEADGMP-InVG-DGGLFEKKLWG 158 human
Q02011        81 RAFRTLLAQMLEEQRELLGDTDAELGPALAAMLLQVSAFVYHLEELLELESRGAPAEEGSEPP-A-PP-RLSLFEQKLRG 157 chicken
XP_003774036  81 RTFHVLLTEVLEDQRAQFTPTERDFHQNIHRVLLQVAAFAYEMEELMALLGHQAPSQETDSGP-V-GGsHRTFLEKKLWG 158 Tasmanian devil
XP_004869796  81 RTFHVLLARLLEDQQVHFTPTESDFHQAIRSLGLQVSAFAYQLEELMVLLEHEIPPNETSGVP-L--G-EGGLFEKKLWG 156 naked mole-rat
XP_003583242  81 RAFHGMLARLLEDQRAHFTPAEEDFHQAIHAVLLQVAAFAYQLEELMALLEHRVPPREAGGPPlL-PG-DAGLFEKKLWG 158 cattle
XP_004174563  81 RAFRTLLAQMLEEQREQLGEADAGLGRALAAVLLQVSAFAYHLEELLRLESRGIPGEEGDGPP-P-PP-RLSLFEQKLRG 157 zebra finch
1CNT_3       159 LKVLQELSQWTVRSIHDLRFISSH-QTGIP 187 human
Q02011       158 LRVLRELAQWAVRSVRDLRQLSKHgPGSGA 187 chicken
XP_003774036 159 LKVLQELMQWTVRSIHDLRLISSPgQNRVP 188 Tasmanian devil
XP_004869796 157 LKVLQELSQWTVRSIRDLRLISSQ-PAGIP 185 naked mole-rat
XP_003583242 159 LKVLQELSRWTVRSVHDLRTISR--QSGVP 186 cattle
XP_004174563 158 LGVLRELAQWAVRSVRDLRQLGKPsSAAGT 187 zebra finch
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