2XHE


Conserved Protein Domain Family
Sec1

?
pfam00995: Sec1 (this model, PSSM-Id:279352 is obsolete and has been replaced by 460020)
Click on image for an interactive view with Cn3D
Sec1 family
Statistics
?
PSSM-Id: 279352
Aligned: 656 rows
Threshold Bit Score: 99.8853
Created: 20-Jun-2015
Updated: 5-Aug-2015
Structure
?
Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
2XHE_A        26 KVLVVDKPALRMISEC--ARMSEILdL-GVTvveDVSkqRKV-----------------LPQFh------gVYFIEPtEE 79  Monosiga brevic...
XP_001745848  44 isLYLDPPILAKIQKF--MGASELKqR-GVV---SFHpmDPT-----------------VRELvegcapsaVFIVRPiPR 100 Monosiga brevic...
CBK24726      36 KCVIIDSQINKQLIFVt-EGSTVLK-EcGIT---QFIalSNTvas------------itSPNV--------LFFIRPiPE 90  Blastocystis ho...
XP_002899917  37 vslVLSKRLAALLTHVfiDGLGVLK-ShHVV---ECLelADDhvt-----------adtTVVY--------LTFAR--TG 91  Phytophthora in...
XP_009533842  36 icFVLDPELNGPLNHVlvDGTAVLK-DhGVK---DFHafGKTvk-------------tsCEFV--------LFLVRPsVR 90  Phytophthora sojae
XP_002501640  34 KALVMDPSFAPTLTSL--CTMSELT-EhGVD---GLYqlEGGsve------------teCDEI--------VFMVKPrVA 87  Micromonas sp. ...
XP_002948061  43 KALVLDPAISGPLGLLdtALTDLLK-EhGVV---KLLylAPGkrlddpsysateprlsdVPTV--------LYLVRTsIA 110 Volvox carteri ...
XP_001703227  43 KALILDPAVSGPLGLLdaGLTDLLT-EhGVV---KLLylEPGkrlddvaynatepkladTRSV--------VYLVRPtVA 110 Chlamydomonas r...
XP_005848402  37 KALVLEAGFEAPLGLI--ADALTLK-EhGVE---VFCllEAQpsvvda------lvdkgVRQL--------VYLTHGqLG 96  Chlorella varia...
XP_003062572  38 KALVLDPLLLTPLQRL--CNLTRLTrEcDVD---RTYslEGGtve------------trCAEI--------VFVVKPrVA 92  Micromonas pusi...
2XHE_A        80 NLDYVIrdfa----------drtpT---Ye-------------------------------------------------- 96  Monosiga brevic...
XP_001745848 101 IVEQIAnii------------kseSrgnPp-------------------------------------------------- 118 Monosiga brevic...
CBK24726      91 DIKMTAnyi------------rklE---Eaes------------------------------------------------ 107 Blastocystis ho...
XP_002899917  92 DARAVAahadk--------llehgD---Derr------------------------------------------------ 112 Phytophthora in...
XP_009533842  91 AMRYVAkyirdlgas---------------------------------------------------------------gs 107 Phytophthora sojae
XP_002501640  88 LMAALNetvrgvi-----ldneldR---Aehreqhgddpalwdpr-------------------------setynpdvpp 134 Micromonas sp. ...
XP_002948061 111 NAQAVAaqv-------------ksR---Pkse------------------------------------------------ 126 Volvox carteri ...
XP_001703227 111 NAQAVAaqi-------------ktR---Tkad------------------------------------------------ 126 Chlamydomonas r...
XP_005848402  97 ACQAAArhvrmcqqgaaavgggahSf------------------------------------------------------ 122 Chlorella varia...
XP_003062572  93 LMKTLAevvravr-----edaeraR---Raharkhaardlagnlhavganllesltslskttadvvsssgsgsgasnvpp 164 Micromonas pusi...
2XHE_A        97 -----aAHLFFLSPVP---DALM--A--KLAsakaVkyvktlKEINT---LFIPKEHRVFTLNePhglVqYYGsr----- 156 Monosiga brevic...
XP_001745848 119 -----eFTVVFLPTKSlecEEHLrqD--GVLg--sIkr---iTSWNA---NLIPLDGDLLTMD-E---P-SAFy------ 172 Monosiga brevic...
CBK24726     108 ---paaFTIFFFPRITrfvRELM--KneGILd--sAt----iISTNL---DIYPMDDDLLVLG-I---P-DSYa------ 162 Blastocystis ho...
XP_002899917 113 ---krrLALYVVGKWTtmlDQAL--DygRVRg--rFq----tGELSM---GFFPLDTDLLTLG-F---R-RTLy------ 167 Phytophthora in...
XP_009533842 108 ssskkrFHLYYVSRRTlvcDEVL--KkeGVFg--sLs----vGEYKL---DLIPFDDDVLTLE-L---D-ACFk------ 165 Phytophthora sojae
XP_002501640 135 pprvpnMTVCFAPASTdacEGEL--RrlGVHd--lLi----rRECAV---DLVPLEPDVFVADc----D-EAWr------ 192 Micromonas sp. ...
XP_002948061 127 ---tqdFSVFFVPRCTkacERIL--EeeGVLg--dFre---iGEYCL---DMVPYDDDVISLE-L---D-TAFy------ 182 Volvox carteri ...
XP_001703227 127 ---ahdFSVCFVPRRTiacERVL--EeeGVLg--dVa----iGEYCL---DMVPYDDDVLSLE-L---D-SAFa------ 181 Chlamydomonas r...
XP_005848402 123 -----dFTLVLMPGRTavaERIL--EeqGVLg--dVa----lRELAL---DWVPLDEDLLSLE-L---P-SAFkarrlln 181 Chlorella varia...
XP_003062572 165 ppatpsFTVFFLPCETekcLETL--EraFVLn--yL------RVGAIpwtRAIPLERDVILVD-Gg-gD-ERWrsgdggp 231 Micromonas pusi...
2XHE_A       157 ----------------------ssSyni-------------------------------dhLVRRLSTlcTTMnVa---P 180 Monosiga brevic...
XP_001745848 173 ------------------------Dfhvqqd------------------------vsplfmTAKSIMSlqMIY-Gl--iP 201 Monosiga brevic...
CBK24726     163 ------------------------Elylkhd------------------------ytclqlTADALTM--IQQ-LygviP 191 Blastocystis ho...
XP_002899917 168 ------------------------Ecgvegn------------------------rsslvdMAAALNL--LQQ-VygkfN 196 Phytophthora in...
XP_009533842 166 ------------------------Efyvdgd------------------------ktnlhtVAASLVK--LQT-VfgmiP 194 Phytophthora sojae
XP_002501640 193 ------------------------Dltlegd------------------------vscvkqCARALHA--LQR-RcgwaT 221 Micromonas sp. ...
XP_002948061 183 ------------------------Dcvcdgd------------------------stplyyTAAAITR--LQL-MfgliP 211 Volvox carteri ...
XP_001703227 182 ------------------------Dcvadgd------------------------stplyyTAAAITR--LQA-LygviP 210 Chlamydomonas r...
XP_005848402 182 twsscfpcatacfsfqrgrtpagvEltvdrd------------------------ksslflVARALHQ--LQQ-QwgtiP 234 Chlorella varia...
XP_003062572 232 gpsss-------tstealkrhvfnEpstsgdgagagssggsggggaggssadaangegitaVARALHD--LQR-VfgtaP 301 Micromonas pusi...
2XHE_A       181 IVRYSSTStpgtermAMql---qkEIdmsvsqglin-------------------------------------------- 213 Monosiga brevic...
XP_001745848 202 RVTAFGPA-------GKrvagilkRLnreldrppm--------------------------------------------- 229 Monosiga brevic...
CBK24726     192 AITALGPH-------SQ-------AVvdmllqartagk------------------------------------------ 215 Blastocystis ho...
XP_002899917 197 SIKYKGEM-------SM-------LVlnhlmemnaggsgmmsss------------------------------------ 226 Phytophthora in...
XP_009533842 195 HVKYKGTM-------AK-------VIyqmmvhfrreqeva---------------------------------------- 220 Phytophthora sojae
XP_002501640 222 VVKGKGTA-------AK-------EIaeamermrreafasdpalnpslfpgnghasdydsssesdenddpnddpnddddk 287 Micromonas sp. ...
XP_002948061 212 RVQGKGPA-------AT-------AVrdmcfrmrressrlpavpplac-------------------------------- 245 Volvox carteri ...
XP_001703227 211 RVQGKGPA-------AT-------AVrdmcfrmrressgltaapplaa-------------------------------- 244 Chlamydomonas r...
XP_005848402 235 HLKGKGDS-------AA-------AVqrimsrmrqeqgt----------------------------------------- 259 Chlorella varia...
XP_003062572 302 IVKGKGRR-------AA-------KVseamerlrreaheketaaedgdgmyedgeeeg---------------------d 346 Micromonas pusi...
2XHE_A       214 ----------------------aregklksqFLILDRAVDLKSPLVHELTYQAAAYDLLn-------------------- 251 Monosiga brevic...
XP_001745848 230 ------------------------vtpeishaVIFDRSVDLVTMMCTQMTYEGALDELYg-------------------- 265 Monosiga brevic...
CBK24726     216 -------------------ltevdlppeidrLILLDRGLDPVSAFVTPLTYEGMLDEVLgiergavtvsekt-------- 268 Blastocystis ho...
XP_002899917 227 -------------gnattgpptgaqrsrldtLILLDRSVDFASVFSTPLTFEAVLDEVMsiqdgfimaspqil------- 286 Phytophthora in...
XP_009533842 221 ------------------gnpigvldpeidtLVLIDRNVDLVTPMCSPMTYEGLLDEILgithgfitvdaeliadd---- 278 Phytophthora sojae
XP_002501640 288 grerdrrgrrfrpahpgvedpapppapaidvLLIIDRDVDPVTPLCTQLTYEGFVDEAVgivngavevt----------- 356 Micromonas sp. ...
XP_002948061 246 ----------gingaggdsavggfvsgridrLILLDREVDLITPMMTQITFEGLVDEVIgirygsvplqstdkrvge--- 312 Volvox carteri ...
XP_001703227 245 ----------tlgaaglagasglglggridrMILIDREVDLITPMMTQITFEGLIDEVTgikhgtvpwlakdkrgggaa- 313 Chlamydomonas r...
XP_005848402 260 -------------------eapaagadgidtLILLDRCVDMVTPMCTQLTYEGLLDEVFgltcgqmkaeapaaaaaaaad 320 Chlorella varia...
XP_003062572 347 daatddikevtdgprplpggyltpvnprvdvVVLLDRDVDAVTPLCTQLTYEGLIDEIIgiendvavipaeedetst--- 423 Micromonas pusi...
2XHE_A       252 --------------------IendiysystvdaggreqqrqvvlgEd--DDIWLQMRHLHISEVFRKVKSSFDEFC---V 306 Monosiga brevic...
XP_001745848 266 --------------------Idlgvaqvpr-------rvfpdvptDkrtNPLFRDVRDQEWMRAASTLAKRMKSYA---T 315 Monosiga brevic...
CBK24726     269 --------lelkgdkmltirL------------------------Nn-sDSFFQEMRDYNVVKVARVLAQKVAQVG---E 312 Blastocystis ho...
XP_002899917 287 ------raddsasndlvpvaM------------------------Ns-tDEIFQMIRDKHIHTIPAALNAQAVRVK---Q 332 Phytophthora in...
XP_009533842 279 ---dgpnsansnrpaqvsvpL------------------------Ns-nDKLYAEVRDYHVERLGMNLQQQAREIReryD 330 Phytophthora sojae
XP_002501640 357 ----------gddgsstrvrL------------------------Ns-nDALFRELRDLNFGRACDALKEKTSSMQreyE 401 Micromonas sp. ...
XP_002948061 313 --sgdshgaaggrgptaptpL------------------------Ns-tDPFYREFRDLPFHVATQRLQQYARDAR---R 362 Volvox carteri ...
XP_001703227 314 gesagegaggggrgpagrtlL------------------------Ns-tDPFYREFRDLPFHVAIMRLGQYVQDAR---R 365 Chlamydomonas r...
XP_005848402 321 gggaggsstaasaapkkvygL------------------------Ns-aDAVFRETRDQFYVGARKWLNETLRTI----Q 371 Chlorella varia...
XP_003062572 424 --vaeedgtppvarpevrarL------------------------Ns-nDALFRELRDVNFGRACDLLKMKSSSMRddyR 476 Micromonas pusi...
2XHE_A       307 SArrLQglrdsqqgeggAGALKQMLKDLPQhREQMQKYSLHLDMSNAINMAFSs---------tI-DSCTKAEQNIVTee 376 Monosiga brevic...
XP_001745848 316 ESe-DArrnv---rsndLKKMRQVSSRLAFlQAEQESIAIHGALMQDVKANLDt---------dEfAERWHLEMSMVR-- 380 Monosiga brevic...
CBK24726     313 Ev-kAKpqsg----nvsMAEFMEFQQKLPDlLNRKQLAQTHYGLFNAVSKVTNn---------eDfRARWQDEHAVLSg- 377 Blastocystis ho...
XP_002899917 333 RFteFQrvsg----tatAAEVNEFVKTVPQmKASQQSIEQHINLLEYLETTTSs---------kPfRDLWQLERKIVDra 399 Phytophthora in...
XP_009533842 331 EFrknr--------dasISEIREFVKRIPGlKQNYQSLQQHINLAELIKKTTDs---------kSfRDLKDAENLVLT-- 391 Phytophthora sojae
XP_002501640 402 TI--KGgkvq----dqtVGEIGGFVKKLG----EKQGLELHSNLAKRCLETTRggagasaddnsAfMRGLEVERMCVE-- 469 Micromonas sp. ...
XP_002948061 363 EYselg--------skdLSVLKSFVKGLPKlEMLDR----LSDVATPPADRVKq---------qPfHDRLNQEQAMVE-- 419 Volvox carteri ...
XP_001703227 366 EYselg--------skdLSELKSFVKGLPKlNMLDR----LSDVATPPAERVRe---------qLfHDRLNQEQAIVE-- 422 Chlamydomonas r...
XP_005848402 372 QFrdQGmht------adINQLRGFVAEl---REKFVRLPLHSGLVEQLAAAIQa---------pGfVARQAVEAGLL--- 430 Chlorella varia...
XP_003062572 477 VI--KEgeie----tqeVKAIGGFVRAIKG-NIHGVGLDLHTTIAKHLLDSTRgade----herRfMSSLEIERMCVE-- 543 Micromonas pusi...
2XHE_A       377 eQDgN--KVRdfIGEVAsvvvd---------------rrvstEDKLRCLMLCVLakngtsshelnnlldnaniatpsrsa 439 Monosiga brevic...
XP_001745848 381 -SE-VgdKYHelIEQYLygldptcrsdvdapqtlrsdfhktmFRTMRLMCLQSLvngglkktleqykrdfvnifgfrhll 458 Monosiga brevic...
CBK24726     378 dGNpVd------LVALAdvg-------------------asfVTVMRLLILYSLvnnglkpkmfdevrhallqiygfdkl 432 Blastocystis ho...
XP_002899917 400 dGVlDt------IEELIyrh-------------------edlRKVLRLLCLYCVvndgmtrhdlerlkvhvvrtygheli 454 Phytophthora in...
XP_009533842 392 -GD----TIFeqLEERIgfq-------------------eplLGVLRQFCLQSVaaggiktknythlsrelvqtygfemm 447 Phytophthora sojae
XP_002501640 470 -GR-DldKILehLRNLVhtsg------------------ddpRRAARLLALASLthggipaaklepvrldmlraygsril 529 Micromonas sp. ...
XP_002948061 420 -GY-EpeASVafIEELMyrg-------------------admVDVLRLLVLLSVvggglprrqldslrmevlhsyghqhl 478 Volvox carteri ...
XP_001703227 423 -GY-EpeASVafIEELMyrg-------------------adtVDVLRLLVLLSAvggglprkqldglrqellhtyghqhl 481 Chlamydomonas r...
XP_005848402 431 ----DegDEMpaIEDLMyqg-------------------eglLPVLRLLLLYCAvhggvptrhyenlrrdilntyghqhl 487 Chlorella varia...
XP_003062572 544 -GK-SadACVdkLEEMIaak-------------------envRRVVRLLALISLchggvakervdalkkamfqsygaavl 602 Micromonas pusi...
2XHE_A       440 iynleml------------------------------gatvvadrrgrkpktmkrierdmpyvlsrwtpIVKDLMEYIAt 489 Monosiga brevic...
XP_001745848 459 tlenllqagllk--------------------phtgktwpqlakafnlymenvgegfddisfsycgycpLSTRLI-DLMa 517 Monosiga brevic...
CBK24726     433 lllhnlqklglli-----------------pketagnfatirarmrleqdgvtgmdmsdmsyvtsgyapLTGRLVQAILl 495 Blastocystis ho...
XP_002899917 455 fsfsildrlrvlyerqp---------rsflpddtgcsfhyvtqslsvidvdvniknpknaafvtsgyapISARLVEEILk 525 Phytophthora in...
XP_009533842 448 lalsnlekagllsrrdt---------lwteasgfglarkafrllnedvdprnprdiayvsrshaagyapLSVRIVESAIk 518 Phytophthora sojae
XP_002501640 530 tvfgameqcgwlatre-----------dksaharafpairkplalvvddvddhdpsdvayafshsgyapASCRLIHHALa 598 Micromonas sp. ...
XP_002948061 479 ltlnaleksgllkaasg---------akshfpsvrkalqlivpeqegpagaaavnvpsdvshlykgyapLSIRLVETALr 549 Volvox carteri ...
XP_001703227 482 ltlnvlekagllkaspgtks---hfsavrkalhlivpeqepapgaggadgagggaeptdvsylykgyapLSIRLVEAALk 558 Chlamydomonas r...
XP_005848402 488 ltlaslakagllqrr-------------egrrsafpaakqqlrlllqegeqidesspqdihytfagyapLSVRLVQQALs 554 Chlorella varia...
XP_003062572 603 mlllaleqrgylrrkedwhaankkskesghgglggltltrrafklvaddvdvaspkdvsfayshsgyapLSVRVCERAVd 682 Micromonas pusi...
2XHE_A       490 gqldlesypavrdgpsvvqpkrasksveedddgpatsar------------------------------------krgnw 533 Monosiga brevic...
XP_001745848 518 rqgkeaersmgealklacpasptildeq---------------------------------------------------- 545 Monosiga brevic...
CBK24726     496 qngvsaeiqkllpvsvke-------------------------------------------------------------- 513 Blastocystis ho...
XP_002899917 526 hghwrgidhvmsrlhgpraevh---------------------------------------------------------- 547 Phytophthora in...
XP_009533842 519 prgwsavqeglrqlpgpsgevtqtts------------------------------------------------------ 544 Phytophthora sojae
XP_002501640 599 gsfrliddvlralpgphfeytqgfdpndgspavtavda--------------------------------------rvfq 640 Micromonas sp. ...
XP_002948061 550 tgwgplqevlvhlpgnsfdvmqtvdsngmpvekpfkagangssgilps-------------------sglgtaasggggg 610 Volvox carteri ...
XP_001703227 559 tgfgplsealqhlpgsafdvvqavdsngmpvekpykpapvsagsaagvagasasasgaapgsglssaassgnvtglgags 638 Chlamydomonas r...
XP_005848402 555 asgwagidsllqqlpgqqfelcqgsdeq---------------------------------------------------- 582 Chlorella varia...
XP_003062572 683 gpwntggaaeaalrelpgpafeyaqgydddgapavkaanyagfekk-----------------------raraierqvae 739 Micromonas pusi...
2XHE_A       534 aknkgnnrslpstpsgvavsgngaagaaesakpklFVFINGTVSYNEIRCAyEVSQs-----sGYEVYIGAHNIATP 605 Monosiga brevicollis
XP_001745848 546 -------qtlpaglkqqepvgstsaagerankpvtLVVFVGGCTVAELSTL-RYLGqq----hERDYVVLTTDVTTG 610 Monosiga brevicoll...
CBK24726     514 ----------------yrqemasslrengmrkkvaLVVLVGGMSYMEMAAI-RQLKrieq--cgyEIVMMTTDIISG 571 Blastocystis hominis
XP_002899917 548 -------------lsendrsdkednkvkskkktvvVVAFVGGVTFLEIAAL-RWIAsf----yPIELVVASTSIING 606 Phytophthora infes...
XP_009533842 545 --------knssedpaapaaaskldnfgseerkvlLVYYLGGVTFMEIAAL-RHLSrqp--dcPYDIIVATTKIVNG 610 Phytophthora sojae
XP_002501640 641 rrreravgtagglgldqhnpnpkpprrgpgrrptcVVFFVGGVTRAEISCL-RFMSsdk-mrmGVDFVVGATSVCGG 715 Micromonas sp. RCC299
XP_002948061 611 agvsvslqgsgslgagvtgtagvgaaagaqhaetvLVVFIGGVTFAEISAL-RFLSsrp--ewPYKFLVLTTKIVNG 684 Volvox carteri f. ...
XP_001703227 639 gmgglataaslsagggglgaggggaggahgqpetvLVVFIGGVTFAEISAL-RFISsrp--dsGFRFVVLTTRIVNG 712 Chlamydomonas rein...
XP_005848402 583 ------gmpverrqgggkaaaeaaaaaasgrrrrvMVVFIGGVTCAEVSAL-RFLSqkg--laNCDFLIATTAMCTG 650 Chlorella variabilis
XP_003062572 740 sggdgdgdaarrgqggddtqgarvpgawrdrrpvvLVVFLGGITRAEVSCL-RFASdsvamrrGVDFVVAATKITSG 815 Micromonas pusilla...
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap