Conserved Protein Domain Family
Gastrin

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pfam00918: Gastrin (this model, PSSM-Id:279286 is obsolete and has been replaced by 459996)
Gastrin/cholecystokinin family
Statistics
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PSSM-Id: 279286
Aligned: 21 rows
Threshold Bit Score: 104.499
Created: 11-Jul-2015
Updated: 5-Aug-2015
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q9PU41         4 GICICVLLAAL-SVS--SLGQQPAgshdgspvaa------------elqqsltepHRHSRAPSsagPLKPAprld---gs 65  chicken
XP_001378995   5 SLRIFVLLAVL-STS--SLGQQPKesshaspggp------------eleqtlaaqRRLARAPAsssQLrvd-------gn 62  gray short-tail...
XP_006635590   4 GICVCVLLAVL-STS--CLGRPASgsedegtpa-------------qlgqslsapRRTARSAPphgQPQPFqrae---ea 64  spotted gar
XP_003969006   4 GLCVCVVLAVL-CTG--CFGLPFSsqlleegqrsappps-evlfkadsqrleeshVQHRRSAP---QLKALplse---en 73  torafugu
XP_004073921   4 GLGVCVVLAVL-CTS--CLGLPVSsapsdegqhslsapsevalpeadtksldgahVRHSRSTT---QLKDLpgae---ed 74  Japanese medaka
XP_005812244   4 GLCVCAVLAVL-CSS--CFGLPFSpkpadedqryfsvps-eavfeadaptlgethLRHSRSSP---QLKPFsqte---ed 73  southern platyfish
XP_001346140   4 GLCVCALLAAL-STSs-CLSLPVhsedgvqs----------------nvgsatghTRHTRAAPpagQINLLtkpe---dd 62  zebrafish
XP_007250490   4 GICACVLLAALySSG--CLALPTHsldegql-----------------egavaehTRHTRAVPlsgQITLLskaqeeeve 64  Mexican tetra
XP_001518765   4 GICIFVVLAAL-SAN--SLGQQTSksshdipave------------eleqslteyQRHARAPLsasQ------------- 55  platypus
XP_002665661   4 GVCVCVILAAL-SVSvsCASRPVSders------------------------lsaRRLARSASltlQ-QPLppag--diq 55  zebrafish
Q9PU41        66 fEQRATIGALLAKYLQQARk-----GSTGRFSVLGNRVQSIDPTHRINDRDYMGWMDFGRRSAEEYEYSS 130 chicken
XP_001378995  63 aDSRSNFGALLARYIQQARk-----GSSARLPVIKN-LQSIDPNHRINDRDYMGWMDFGRRSAEEYEYSS 126 gray short-tailed opossum
XP_006635590  65 aEQRASLGELLARLLN--Rk-----GSFRRNSTANSKASGLSANHRIKDRDYLGWMDFGRRSAEEYEYSS 127 spotted gar
XP_003969006  74 pDSRANLSELLARLIST-Rk-----GSVRRNSAANNRGVGLSANHRIADRDYLGWMDFGRRSAEEYEYSS 137 torafugu
XP_004073921  75 gDSRANLSELLARLIST-Rk-----GSVRRNSSANNRGGVLRANHRIADRDYLGWMDFGRRSAEEYEYSS 138 Japanese medaka
XP_005812244  74 aDSRANLSELLARLIS-SRk-----GSVRRNSMAQKKG-GLDTKHRIADRDYIGWMDFGRRSAEEFEYAS 136 southern platyfish
XP_001346140  63 eEPRSSLTELLARIISTk-------GSYRRSPAANSRTMG--ASHRIKDRDYLGWMDFGRRSAEEYEYSS 123 zebrafish
XP_007250490  65 gDPARKLNELLARLISRKEdfpylsGSYRRSPASRS----ANVNHRIKDRDYLGWMDFGRRSAEEYEYSS 130 Mexican tetra
XP_001518765  56 ---RANPRVLLARFIQQAKk-----EPSEK------------PRKPPTPRDYFGWMDFGRRSAEEYDYSS 105 platypus
XP_002665661  56 pDTRANLSQLLAKLIS-SKk-----GSVRRNSSMNSRANS--VNHRIKDRDYVGWMDFGRRSAEEYEYSS 117 zebrafish
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