4RCN,3OUU


Conserved Protein Domain Family
CPSase_L_chain

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pfam00289: CPSase_L_chain (this model, PSSM-Id:278706 is obsolete and has been replaced by 425585)
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Carbamoyl-phosphate synthase L chain, N-terminal domain
Carbamoyl-phosphate synthase catalyzes the ATP-dependent synthesis of carbamyl-phosphate from glutamine or ammonia and bicarbonate. This important enzyme initiates both the urea cycle and the biosynthesis of arginine and/or pyrimidines. The carbamoyl-phosphate synthase (CPS) enzyme in prokaryotes is a heterodimer of a small and large chain. The small chain promotes the hydrolysis of glutamine to ammonia, which is used by the large chain to synthesize carbamoyl phosphate. See pfam00988. The small chain has a GATase domain in the carboxyl terminus. See pfam00117. This domain is structurally related to the PreATP-grasp domain.
Statistics
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PSSM-Id: 278706
Aligned: 99 rows
Threshold Bit Score: 97.9217
Created: 19-Jun-2015
Updated: 5-Aug-2015
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4RCN_B          2 TASLLVANRGEIALRIIRTATEL---------GMRTVAVYAAD--DAHSP---HVHAADEAMPL-PGSgppayln----- 61   Mycobacterium...
Q72B06          6 GKAILVANRGIPARRICRSIRE----------RFDAVAVMTATdvDKTSP---AASAAQELLLLgADPrayldi------ 66   Desulfovibrio...
Q8EIJ9        940 INKVLVHARGCTAVKLIRKAHDN---------NINVVLVASDP--DMTAVpadMLKESDKLVCLgGNTsdesyln----- 1003 Shewanella on...
Q7RNW8        420 IKKLLIANNGMAALKCILSLKEWlfktfndenLIQIIVLATEDdiKSNSK---YISLSDKVIKVpPGKnsynyan----- 491  Plasmodium yo...
Q28559        118 IEKVLIANNGIAAVKCMRSIRRWsyemfrnerAIRFVVMVTPEdlKANAE---YIKMADHYVPVpGGPnnnnyan----- 189  sheep
Q4Q5W1         31 IKRLLIANNGLAAVKGMDSIRSWmyehtgdseAVQFVVMATPEdlKANAE---FISLADKHIPVpGGMnsnnyan----- 102  Leishmania major
B9FK36        135 IHSVLVANNGMAAAKFMRSVRTWandtfgsekAIQLIAMATPEdlRINAE---HIRIADQFVEVpGGTnnnnyan----- 206  Japanese rice
XP_001420225   11 IRKVLIANNGLGAVKAIRSMRLWayetfksheVLHLVCMATPDdlAANAE---YIRLADEFITVeGGSnrnnyan----- 82   Ostreococcus ...
WP_009949100    2 FSRVAIVNRGEAAMRLVHAVRELaae---tgeRIETVALHTDV--DRTAT---FVREADLRYDLgPASarpyld------ 67   Saccharopolys...
WP_041856190    5 FRRIAIVNRGEAAMRIIHAVREFnhe---hgtDLRTIALFTQP--DRQSM---FVREADESFCLgPAHerdsvtkqlrss 76   Candidatus Ko...
4RCN_B         62 ---qaallaVAENTGATLIHPGYGFLSENAEFAKACAA-ASHTFVGPDGRVL 109  Mycobacterium avium subsp. paratuberculos...
Q72B06         67 ----driisLAKQRGVVAIHPGWGFASEDDRFPSKCHE-AGLTFIGSTAEAM 113  Desulfovibrio vulgaris str. Hildenborough
Q8EIJ9       1004 ---aysvlkVAEYEQVDALHPGIGFLSESPQFAALCVN-NGVNFVGPSVHSM 1051 Shewanella oneidensis
Q7RNW8        492 ---vslivdIAKKENVDAVWPGWGHCSENPLLSSMLEK-ENIIFVGPTDNVM 539  Plasmodium yoelii yoelii
Q28559        190 ---velildIARRIPVQAVWAGWGHASENPKLPELLLK-NGIAFMGPPSQAM 237  sheep
Q4Q5W1        103 ---vdvimqTALQNMCDAIYPGWGHASENSALPRECMKsKRVTFLGPSEDAM 151  Leishmania major
B9FK36        207 ---vqliveIAERTGVSAVWPGWGHASENPELPDALTA-KGIVFLGPPASSM 254  Japanese rice
XP_001420225   83 ---vdlivkVARTCGADAVWPGWGHASENPQLPSQLAY-HDIAFLGPPASAM 130  Ostreococcus lucimarinus CCE9901
WP_009949100   68 ---lgvlerALVESGADAAWVGWGFVAEDPAFAELCEK-IGVTFIGPSAEAM 115  Saccharopolyspora erythraea
WP_041856190   77 yldyellrnALTESKSEAAWVGWGFVAEHADFADLCRH-MGIVFIGPSGEVM 127  Candidatus Koribacter versatilis
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