Conserved Protein Domain Family
PHD_BS69

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cd15537: PHD_BS69 
PHD finger found in protein BS69
Protein BS69, also termed zinc finger MYND domain-containing protein 11 (ZMYND11 or ZMY11), is a ubiquitously expressed nuclear protein acting as a transcriptional co-repressor in association with various transcription factors. It was originally identified as an adenovirus 5 E1A-binding protein that inhibits E1A transactivation, as well as c-Myb transcription. It also mediates repression, at least in part, through interaction with the co-repressor N-CoR. Moreover, it interacts with Toll-interleukin 1 receptor domain (TIR)-containing adaptor molecule-1 (TICAM-1, also named TRIF) to facilitate NF-kappaB activation and type I IFN induction. It associates with PIAS1, a SUMO E3 enzyme, and Ubc9, a SUMO E2 enzyme, and plays an inhibitory role in muscle and neuronal differentiation. Moreover, BS69 regulates Epstein-Barr virus (EBV) latent membrane protein 1 (LMP1)/C-terminal activation region 2 (CTAR2)-mediated NF-kappaB activation by interfering with the complex formation between TNFR-associated death domain protein (TRADD) and LMP1/CTAR2. It also cooperates with tumor necrosis factor receptor (TNFR)-associated factor 3 (TRAF3) in the regulation of EBV-derived LMP1/CTAR1-induced NF-kappaB activation. Furthermore, BS69 is involved in the p53-p21Cip1-mediated senescence pathway. BS69 contains a plant homeodomain (PHD) finger, a bromodomain, a proline-tryptophan-tryptophan-proline (PWWP) domain, and a Myeloid translocation protein 8, Nervy and DEAF-1 (MYND) domain.
Statistics
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PSSM-Id: 277012
Aligned: 17 rows
Threshold Bit Score: 64.6733
Created: 14-Aug-2013
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Zn binding siteputative
Feature 1: Zn binding site [ion binding site], 8 residue positions
Conserved feature residue pattern:C C C [CH] H [CH] C [CH]Click to see conserved feature residue pattern help
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1         #  #         #  #    #  #                           #  #
Q15326       102 YCFECHLPG-EVLICdlCFRVYHSKCLsdefrl------------rdssspWQCPVC 145 human
CDS32716      87 YCFHCHLPG-PVINCstCFRVYHEVCYkrsfevnsffdfpdekyrpsngsaSSCIIC 142 Hymenolepis microstoma
EHA25817      93 YCRICQAAGgRLEPCstCRLAFHADCIpagflr-------------dsrdsLFCPIC 136 Aspergillus niger ATCC 1015
XP_003728763 102 YCFECHAGG-DVLCCgtCYRVYHADCVkvddpe-------------kilslWICPIC 144 purple urchin
NP_001071051 121 YCFECHLPG-DVMECdgCFRVYHLRCVsedhrp------------rdttshWQCGIC 164 zebrafish
ELU10691     102 YCFDCHQPG-EVVECdeCWRVYHPTCTeddw----------------taekFICAVC 141 Capitella sp. I Grassle & Grassle, 1976
XP_002733117 102 YCFICHKPG-EIIRChgCFRVAHSRCLektnkp------------apehghWYCYVC 145 Saccoglossus kowalevskii
XP_002412694  60 YCFECHRGG-DVLLCtsCHRVYHVVCVkedls---------------neekFVCSVC 100 black-legged tick
EKC36551     101 YCFECHTAG-EVLPCsdCWRVFHPSCTleew----------------tgpkFTCSIC 140 Pacific oyster
XP_002128601 108 YCFRCHEAG-TVIPCsgCSFVYHPDCLtimesk-------------dlnstWKCPWC 150 Ciona intestinalis

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