Conserved Protein Domain Family
PA_GRAIL_like

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cd02122: PA_GRAIL_like 
PA _GRAIL_like: Protease-associated (PA) domain GRAIL-like. This group includes PA domain containing E3 (ubiquitin ligases) similar to human GRAIL (gene related to anergy in lymphocytes) protein. Proteins in this group contain a C3H2C3 RING finger. E3 ubiquitin ligase is part of an enzymic cascade, the end result of which is the ubiquitination of proteins. In this cascade, E1 activates the ubiquitin, the activated ubiquitin is carried by E2, and E3 recognizes the acceptor protein as well as catalyzes the transfer of the activated ubiquitin from E2 to this acceptor. GRAIL, a transmembrane protein localized in the endosomes, controls the development of T cell clonal anergy, and may ubiquitinate membrane-associated targets for T cell activation. GRAIL1 is associated with, and regulated by, two isoforms of otubain 1 (the ubiquitin-specific protease). Additional E3s belonging to this group include human (h)Goliath and Xenopus GREUL1 (Goliath Related E3 Ubiquitin Ligase 1). hGoliath and GRAIL both have the property of self-ubiquitination. hGoliath is expressed in leukocytes; its expression and localization is not modified in leukemia. GREUL1 may play a role in the generation of anterior ectoderm. The significance of the PA domain to these proteins has not been ascertained. It may be a protein-protein interaction domain. At peptidase active sites, the PA domain may participate in substrate binding and/or promoting conformational changes, which influence the stability and accessibility of the site to substrate.
Statistics
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PSSM-Id: 239037
Aligned: 25 rows
Threshold Bit Score: 128.956
Created: 14-Jan-2005
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
PA/protease or
Feature 1:PA/protease or protease-like domain interface [polypeptide binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                     
XP_420351  36 NVSWedga---ggnrSGWeagesGLYGqdsPLQAAAGll---vLPDGRDAFNACSAltnfs---aappGGGPGWVALIQR 106 chicken
EAT35498   73 NYSYvdgn----emeFHEge-liGKFGe-gRVLNRTGllvhvtKSDDPNEHRGCSKdwngtk-gqplpANGIKWIALILR 145 yellow fever mosquito
Q06003     73 NWSYvehgnmlcnmeFAQe---qARYGe-gKVLNVTGrlihitATDNFSDDYACTPyirgtl-gapipDKGETWIALVRR 147 fruit fly
XP_559104  48 NYSFtgpdg--hlieFGSe---sAKYGe-gRVLNRSGllvhisNSANHSDHTGCSKqwsgtl-ggtipERDAPWIALVRR 120 Anopheles gambiae ...
XP_966546  62 NVSNd---------gVRWdktevGRYGg-gYVGPAFGvlvhvaAENNPDDHTGCKLplhstrsnrklpPPGEPWIALIKR 131 red flour beetle
NP_997780  38 NISYtnpe----nnrSTWfqeemGLYGqdsPKAYVKG------NVYLASPTYGCDDdtfy-----grpNGSKGWIALIQR 102 zebrafish
AAN75222    9 NRMLs----------ELGe---tGVFGrssILKRVAGv----vVPPEGKIQNACDPnttf-----ilpRNKEPWIALIER 66  house mouse
NP_078815  42 NYTAi----------ETCe---cGVYGlasPVANAMGv----vGIPKNNNYQACDHnte-------fsNTKKPWIALIER 97  human
Q8AWW4     40 NYSYvyd------nkTYGeegeiGVFGqdsPIERAAGlv---vLPKSEKLYTACKDnvnf----svpsGWTGPWIALIQR 106 African clawed frog
BAC10969  131 NRTEeki------slLLPayktvGKFGyhsPREAIYGkvvhiaDTSIPNSHFGCTGeians---keipPNREPWIALIAR 201 Halocynthia roretzi
Feature 1                                    ###                                           
XP_420351 107 GGgCSFADKIRLAAERGAAAAVIYNYrgtgNDVLPMSHAg-aGSIVAIMIGN----LKGMEILRRies-glKVTMVI 177 chicken
EAT35498  146 GN-CNFEEKVKHAYMHGAAGVIIYNDkd-dPRLDKMKINd-kERNITAVFTTk---AKGHELIDIlerqgyEVTIEI 216 yellow fever mosquito
Q06003    148 GR-CTFEEKVKHVYQQNAAGVIIYNDkq-vMQLEKMQIKg-kTRNIAAVITYq---NIGQDLSLTldk-gyNVTISI 217 fruit fly
XP_559104 121 GS-CNFEDKVKHAYERGAAGIIIYNDkn-dTKLEKMKINd-kERNITAVFTTnamgRELIEILEVhr---sVVQMRI 191 Anopheles gambiae str...
XP_966546 132 GR-CNFEVKVENAFRSNAAGVLVYNDrd-sATLDKMKLSsdsGRNISAVFTYk---WKGEDLARLae---nDSKVYI 200 red flour beetle
NP_997780 103 GNgCTFTEKINIAAMNGAAAAIIFNDfgseNRVIQMSHPg--TTIVAIMIGN----YRGMELVQLld---qGVPVAI 170 zebrafish
AAN75222   67 GG-CAFTQKIKVASEHGARGVIIYNFpgtgNQVFPMSHQa-fEDIVVVMIGN----IKGMEILHLir---kGVHVTV 134 house mouse
NP_078815  98 GN-CTFSEKIQTAGRRNADAVVIYNApetgNQTIQMANFg-aVDIVAIMIGN----LKGTKILQSiqr-giQVTMVI 167 human
Q8AWW4    107 GGgCTFTEKINRAAERGARAVVVYNNgi-dNEVFEMSHPg-tKDTVAIMIGN----LKGNEIVDLikg-gmQVTMVI 176 African clawed frog
BAC10969  202 GK-CTFLVKIKLAETYNASAVVVYDNdpsgSVEVMRTIG---TNAVSLMINI----NAGTKVAHVids-gmKMYMNI 269 Halocynthia roretzi

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