Conserved Protein Domain Family
Tma20

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COG2016: Tma20 (this model, PSSM-Id:224927 is obsolete and has been replaced by 441619)
Predicted ribosome-associated RNA-binding protein Tma20, contains PUA domain [Translation, ribosomal structure and biogenesis]
Statistics
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PSSM-Id: 224927
Aligned: 16 rows
Threshold Bit Score: 172.476
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
19173675  23 CQVLQQIGLPCLQMKSLFNKVEISSScclgkkdkrdinKQLGYEVlekneTYMVHRCKNKASLISLGGSAILFCLNR--- 99  Encephalitozoon cun...
14600778  10 ARLEARA-LSKKERRSLLERLKPYYTr-----------IPFSEKAdl--rLVKARTDSGEYEIITVDGVPCLFEWSDg-- 73  Aeropyrum pernix
20092679   1 MKVKSRVQLRKNVKNKMLKDLESTFGee---------mIELEKKT-----LEKVTL--DEFSLILMDSKPLLFEVEG--- 61  Methanosarcina acet...
20093659   1 MKVSRRHPISEKDLQEVLEELRVSSGvs--------lgEVLTGLV-----EVAYVKDDDIERLLIKDGKVMAFERHE--- 64  Methanopyrus kandle...
18312763   1 ---MKRLRLSNKEVKELREKFDFMKP-------------ILNDAD-----VVEVLQLTEKEFIYLVDGEPLFLKVVTneg 59  Pyrobaculum aerophilum
14590609   4 MELKIKHPLSKKDVKEIIAQLSQMFG------------EEIARKMlnkkdEVKVAEFDKTTEIILVNDKPMFIRRKD--- 68  Pyrococcus horikoshii
19113366  16 GTTPIKSSIQRGIKAKLVQAYPNLKQvi---------dELIPKKS-----QLTQIKCEDRLFLYTLNGEIILFQHFDg-- 79  fission yeast
13542272   1 --MTQKHFLSKRELKVLVSSAAEIGI-------------DLSGEE------VEVSSSH-KVSCYYIKGKPMAFQTD---- 54  Thermoplasma volcanium
16082395   1 --MTSKHFISKKEAKRIWEAMARYGI-------------DITGES------LEVAAQK-SASAYYIGGKPMVFQAG---- 54  Thermoplasma acidop...
15791374   1 MDVSSRHHLRSDDIDEIGDALRTGLG------------VELDGDA-----YERVTFADEEFEIVLVDGDPLVWYPDG--- 60  Halobacterium sp. N...
19173675 100 -KYFPTIRYLEGHGGGFY------EVFLDEGALEPLCRGADVMIPGVLKYKDLIKkgfeAGDTIVVRIIG-KSIVAVGEA 171 Encephalitozoon cun...
14600778  74 -RIYPTLQCLKAFGVDWLk----gVVLVDKGAAIALAKGAHLMIPGVVGVEGSFT----RGDVVAALYHEtRTPVMVGVA 144 Aeropyrum pernix
20092679  62 -HLFPTVRGALEMELQKR------LVVVDKGAIQFVSNGADIMAPGILEADPEIK----EGDLVIIVEEThRKALAIGKA 130 Methanosarcina acet...
20093659  65 -GWFPTIHALLQLDEGNYg----hVVIVDMGAVKPVASGADIMVPGIVEVRGEFE----EGDGVVVIDERnRRPLAVGIA 135 Methanopyrus kandle...
18312763  60 eYVIPTLFLIHKSPRGSLlps-fpKAVVDAGAVKRIINGADVMRPGIKKLEGDFN----KGSIVFVADEK-GRTIAIAAS 133 Pyrobaculum aerophilum
14590609  69 -LIFPLVIALYNLSDEEDlrkwprRVVVDEGAVPHILNGADVMAPGIVDADEGIK----EGDFVFVVEEKyGRPLAIGIA 143 Pyrococcus horikoshii
19113366  80 -PIIPSLRLVHKCPDAFT------QVRVDRGAIKFLLSGANIMIPGLVSKGGNLPddieKDQYVIVTAEGkEAPAAIGLT 152 fission yeast
13542272  55 -RLIPSVYLLNYKNPEKR------AVVVDAGAEPHIINGSNVFAQGILSIDSSIK----KGDIVFIKSEK-GYFIGVGIA 122 Thermoplasma volcanium
16082395  55 -DLIPSVYLLNYRNPSRN------IVTVDEGAEPHILNGSDLFAPGIVSMDDSIR----KGDMIFVKSSK-GYFIAVGMA 122 Thermoplasma acidop...
15791374  61 -EPFVTVAGANRTDPSTG------VVTVDAGAVSFVSDGADVMRPGITAASPEIT----AGDLVVIQEAAhGKTLAVGRA 129 Halobacterium sp. N...
19173675 172 IVGLKDME----ASSRGVGIEVYHRVGDGLYTERQL 203 Encephalitozoon cuniculi
14600778 145 EVDSSALEklyrEKARGRAVRRVHRLGDALWELAQE 180 Aeropyrum pernix
20092679 131 LMEGQQMV----DADSGKAIKSITHVGDKLWNFEF- 161 Methanosarcina acetivorans C2A
20093659 136 LMSAREIE----ESERGRAVRNVHHVGDRLWEARF- 166 Methanopyrus kandleri AV19
18312763 134 LYSKGEIE----QMEKGKVLLNLHYLGDRAWRASLD 165 Pyrobaculum aerophilum
14590609 144 LMSGKVMK----EKNRGKAVKVIHHARDKIWEVTAR 175 Pyrococcus horikoshii
19113366 153 KMSAKEMK----ETNKGIGIENVHYLGDNLWKTILE 184 fission yeast
13542272 123 ERNAEEIM----NEKKGLAVRLIHHPDDDLMKAFS- 153 Thermoplasma volcanium
16082395 123 EMDAGEVM----ATKRGKAARIIHFPGDELIRAFP- 153 Thermoplasma acidophilum
15791374 130 LVDGTEM-----DGESGKVVSSLHHVGDELFEFSV- 159 Halobacterium sp. NRC-1
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