Conserved Protein Domain Family
DusA

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COG0042: DusA (this model, PSSM-Id:223120 is obsolete and has been replaced by 439812)
tRNA-dihydrouridine synthase [Translation, ribosomal structure and biogenesis]
Statistics
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PSSM-Id: 223120
Aligned: 98 rows
Threshold Bit Score: 117.422
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
19115484 229 PQEKNLIDWRDRKILAPLTTVGNPPFRRLCGS----LGA--DTFYSEMAMCYPLMQGHQPEWALVRGLnyeREMMRggrr 302 fission yeast
15594570   1 ------MLMNRKISIAPMVNITDEHFRYLIRL-----LSkkVTLYTPMISAKSIIMGDVKKIVKQNPL-----ESP---- 60  Lyme disease spiroc...
15595082   6 FMKFLFDIPLPIMILAPMEDVTDTVFRNLIHLigsaEGEp-HIYFTEFISTKGILNGSKQSVQHVFLKp-nELNRP---- 79  Lyme disease spiroc...
16077870   2 TENFWRELPRPFFVLAPMEDVTDVVFRHVVSE-----AGrpDVFFTEFTNSESYCHPDGKDSVRGRLTf-tEDEQP---- 71  Bacillus subtilis
15896694   1 ----------MKYYFAPLEGITGYIYRNAYEK----FFGgiDKYFTPFIVPTSSKSLTSRELKDVLPE---NNKVTf--- 60  Clostridium acetobu...
19074540   3 GLCTSPMSQEVEISLAPMMDVTTAHFRRFIRL-----TSekTVLFTEMIVSNTVIHVPRDKLRERLGEy----DDR---- 69  Encephalitozoon cun...
15795010   1 MNDNTHTLPPRRLSVAPMLDWTDRHYRYMARQ-----ITrnTWLYSEMVNAGAIVYGDKDRFLMFNEG-----EQP---- 66  Neisseria meningiti...
15676263   1 MNDNTHTLPPRHLSVAPMLDWTDRHYRYLARQ-----ITrnTWLYSEMVNAGAIVYGDKDRFLMFNEG-----EQP---- 66  Neisseria meningiti...
15925787     --------------------------------------------------------------------------------     Staphylococcus aure...
15925793   2 KENFWSELPRPFFILAPMEDVTDIVFRHVVSE-----AArpDVFFTEFTNTESFCHPEGIHSVRGRLTf-sEDEHP---- 71  Staphylococcus aure...
19115484 303 giLGVQLATGKLwQATKTAQVIAEQCDgVDFLDLNCGCPIDLVFRQGAGSSLLENPGRLLRNLQGMDAVSG--QIPVTVK 380 fission yeast
15594570  61 --IAIQIATNSK-NDALKAIQILEKHFnFDEYNLNVGCPSLKIQNANCGACLMGNANQVGEILKTMKENTN---KPISIK 134 Lyme disease spiroc...
15595082  80 --LIAQIWGNVP-EQFYRAIEILGSMG-FWGIDINMGCPKSKIIKKGVCSALINNKSLAKEIILASKEACArfNLPLSVK 155 Lyme disease spiroc...
16077870  72 --IVAHIWGDKP-ENFRKMSIGMAELG-FKGLDINMGCPVPNVAGNGKGSGLICRPAVAAELIQAAKAGG----LPVSVK 143 Bacillus subtilis
15896694  61 --LVPQILTNDA-NKFIFTTEKLMNLG-YSEVNLNLGCPSGTVVSKGRGAGFLKKRQELDEFLEKIFSKSP---AKISIK 133 Clostridium acetobu...
19074540  70 --TVVQIGGSDA-TSMVEAVRILQGLG-YRMFNLNCGCPSSRVKKGSFGAVLMLNRELVAEIINRVYGETG---AVLSLK 142 Encephalitozoon cun...
15795010  67 --VALQLGGSDP-SDLAKAAKAAEEYG-YNEVNLNCGCPSPRVQKGAFGACLMNEVGLVADCLNAMQDAVG---IPVTVK 139 Neisseria meningiti...
15676263  67 --VALQLGGSDP-SDLAKAAKAAEAYG-YNEVNLNCGCPSPRVQKGSFGACLMNEVGLVADCLNAMQDAVK---IPVTVK 139 Neisseria meningiti...
15925787     --------------------------------------------------------------------------------     Staphylococcus aure...
15925793  72 --MVAHIWGDKP-EQFRETSIQLAKMG-FKGIDLNMGCPVANVAKKGKGSGLILRPDVAAEIIQATKAGG----LPVSVK 143 Staphylococcus aure...
19115484 381 LRMGNKDDHp-------VVKNLIGRIFNETNTSAATLHGRSRQQRYSKN--------ANWDYIGEIASKVKSmnERIDEL 445 fission yeast
15594570 135 HRLGIRPLSsdyknesySEVKNFVKIISDFGIKNFIVHARIAILKGFSPknnrnipkLRHEFVYKLKKENKN--LFIEIN 212 Lyme disease spiroc...
15595082 156 TRHGFSYPE----------VDDWLGFLLGLEIDMLTVYPRLAVNQSKGPvn-----fDIFYELVKLRNNLSPs-TLIIGN 219 Lyme disease spiroc...
16077870 144 TRLGYTDVD---------EWREWLTHILKQDIANLSIHLRTRAEMSKVDah-----wELIPEIKKLRDEVAPdtLLTING 209 Bacillus subtilis
15896694 134 TRIGKDSPD---------EFYELIKIFNKYPLEELIIHPRIQTDFYNNk--------PNMKVFKDALELSKS---TVCYN 193 Clostridium acetobu...
19074540 143 IRTGVDEHDgv-----dFLDGFVSHIKKNTPTRTFYVHARRCWLEGLSPqqnrkappLDYASVYAIKSLHPe--LRIILN 215 Encephalitozoon cun...
15795010 140 HRIGVDRQTey-----qTVADFVGTLRDKTACKTFIVHARNAWLDGLSPkenrdvppLKYDYVYRLKQEFPG--LEIIIN 212 Neisseria meningiti...
15676263 140 HRIGVDRQTey-----qTVADFVGTLRDKTACKTFIVHARNAWLDGLSPkenrdvppLKYDYVYRLKQEFPG--LEIIIN 212 Neisseria meningiti...
15925787   1 -----------------------------------------------------------MMCKLEWDDEINFgkISFLSH 21  Staphylococcus aure...
15925793 144 TRLGYYEID---------EWKDWLKHVFEQDIANLSIHLRTRKEMSKVDah-----wELIEAIKNLRDEIAPntLLTING 209 Staphylococcus aure...
19115484 446 P---EDSLRTQPLSLIG-NGDCYSWQDWYDGVN------------KGVDT--VMIARGALVKPWIFEEIEARQFi---dK 504 fission yeast
15594570 213 GginNSEQIKKHLS-F--VDSVMIGRSAFENPYfiana---srefLNETDe---ILTRKDILMQMVEYIKEYEN-----Y 278 Lyme disease spiroc...
15595082 220 GdvlSLKEARYYVDKYL-IDGIMFGRGIFDNLNlfkp----fskhFLDSN----LNFRLNILKFHIKDFHATWGl----E 286 Lyme disease spiroc...
16077870 210 di-pDRQTGLKLAEQYG-VDGIMIGRGIFTNPFafek------epkE-----HSSKELLDLLRLHLDLHDEYSKe---eA 273 Bacillus subtilis
15896694 194 GdifQSNDYIKLIEEFSnLGVVMLGRGIISNPNiikk----insnNVLEK--EVLKKFHDAIYEEYQDILSGEK------ 261 Clostridium acetobu...
19074540 216 GsigEGNLDKIHNL-----DGVMIGRGAIRNVFvfwdienrmsmcGAERRckDGRECQPDTGIQKIECSDVEDHksrraR 290 Encephalitozoon cun...
15795010 213 GgitTNEAIAGHLQh---VDGVMVGREAYHNPMvmrewd-rlfygDTANPi--gYADLVQRLYTYSQAQIQAGR-----G 281 Neisseria meningiti...
15676263 213 GgitTNEAIAGHLQh---VDGVMVGREAYHNPMvmrewd-rlfygDTRSPi--eYADLVQRLYTYSQAQIQAGR-----G 281 Neisseria meningiti...
15925787  22 ShipDRKTGLELAEKYG-IDGVMIGSGIFHNPFafek------eprE-----HTSKELLDLLRLHLSLFNKYEKd---eI 86  Staphylococcus aure...
15925793 210 di-pDRKTGLELAEKYG-IDGVMIGRGIFHNPFafek------eprE-----HTSKELLDLLRLHLSLFNKYEKd---eI 273 Staphylococcus aure...
19115484 505 SSTQRLEMLEQYCNNGLEywgsdsqGVNTTRRF----FLEFMSFFH---RYTPIALYEVQR 558 fission yeast
15594570 279 LSINILFKHLMGIVFSKE-------GAKKFRQNltapFPKNLKKHEillKAIETLPEKILN 332 Lyme disease spirochete
15595082 287 KDFNKLKKYFKIYFTEKE-------RQSKYFSN----LINSKTYEEl-fENLKVIDMVGDF 335 Lyme disease spirochete
16077870 274 RPYKPLPRFFKIYLRGFR-------GASELRNQcm-nTKSTDEVRAlldDFERKYLDGIE- 325 Bacillus subtilis
15896694 262 NVLFKMKEIWFYMIHLFK-------DSDKFAKKir-kANRLRDYEAiisALFGEFDLI--- 311 Clostridium acetobutylicum
19074540 291 KVLSVVKEYFDWFSPSEQl------KPIHVQPVl--nLMVAKRGCKayrRRLNELVVGKAG 343 Encephalitozoon cuniculi
15795010 282 TILRHIVRHSLGLMHGLK-------GARTWRRMlsdaTLLKDNDGSlilEAWKEVERANTR 335 Neisseria meningitidis Z2491
15676263 282 TILRHIVRHSLGLMHGLK-------GARTWRRMlsdaTLLKDNDGSlilEAWKEVERANMR 335 Neisseria meningitidis MC58
15925787  87 RQFKSLRRFFKIYVRGIR-------ALANFDIN---------------------------- 112 Staphylococcus aureus subsp. aureus N315
15925793 274 RQFKSLRRFFKIYVRGIR-------GASELRHQlm-nTQSIAEARAlldEFEAQMDEDVKI 326 Staphylococcus aureus subsp. aureus N315
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