2VIF


Conserved Protein Domain Family
SH2_SOCS6

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cd10387: SH2_SOCS6 
Click on image for an interactive view with Cn3D
Src homology 2 (SH2) domain found in suppressor of cytokine signaling (SOCS) proteins
SH2 domain found in SOCS proteins. SOCS was first recognized as a group of cytokine-inducible SH2 (CIS) domain proteins comprising eight family members in human (CIS and SOCS1-SOCS7). In addition to the SH2 domain, SOCS proteins have a variable N-terminal domain and a conserved SOCS box in the C-terminal domain. SOCS proteins bind to a substrate via their SH2 domain. The prototypical members, CIS and SOCS1-SOCS3, have been shown to regulate growth hormone signaling in vitro and in a classic negative feedback response compete for binding at phosphotyrosine sites in JAK kinase and receptor pathways to displace effector proteins and target bound receptors for proteasomal degradation. Loss of SOCS activity results in excessive cytokine signaling associated with a variety of hematopoietic, autoimmune, and inflammatory diseases and certain cancers. Members (SOCS4-SOCS7) were identified by their conserved SOCS box, an adapter motif of 3 helices that associates substrate binding domains, such as the SOCS SH2 domain, ankryin, and WD40 with ubiquitin ligase components. These show limited cytokine induction. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites.
Statistics
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PSSM-Id: 198250
Aligned: 17 rows
Threshold Bit Score: 190.049
Created: 26-May-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
phosphotyrosinehydrophobic
Conserved site includes 5 residues -Click on image for an interactive view with Cn3D
Feature 1:phosphotyrosine binding pocket [polypeptide binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                          #                 # #       #            #                    
2VIF_A        15 TEELKKLAKQGWYWGPITRWEAEGKLANVPDGSFLVRDSSDDRYLLSLSFRSHGKTLHTRIEHSNGRFSFYEQP-DVEGH 93  human
NP_001072006 243 TNEFKKLAQQGWYWGPLTRSEAEDKLNETPNGSFLVRDSSDERYLLSLSFRSFGRTLHTRIEHSSGNFSFYENN-RMQSY 321 Ciona intestinalis
NP_001086732 371 TEELKKLARQGWYWGPITRWEAEEKLANVLDGSFLVRDSSDDRYLLSLSFRSHSKTLHTRIEHSNGRFSFYEQP-DVEGH 449 African clawed ...
AAH54619     370 TAELKKLAKQGWYWGPITRWEAEEKLTNLPDGSFLVRDSSDDRYLLSLSFRSQTKTLHTRIEHSNGSFSFYEQP-DIEGH 448 zebrafish
EFN74396     229 AEELLNLSKYGWYWGPISGDEADTKLISEPDGAFLVRDSSDDRYVLTLSFKSSGKMLHARMEHSGGLFSLCNQCtESEGF 308 Camponotus flor...
NP_001096240 371 TEELKKLARQGWYWGPITRWEAEEKLANVLDGSFLVRDSSDDRYLLSLSFRSHSKTLHTRIEHSNGRFSFYEQP-DVEGH 449 western clawed ...
NP_004223    373 TEELKKLAKQGWYWGPITRWEAEGKLANVPDGSFLVRDSSDDRYLLSLSFRSHGKTLHTRIEHSNGRFSFYEQP-DVEGH 451 human
NP_001182102 353 TVELKKLAKQGWYWGPITRWEAEEKLASLPDGSFLVRDSSDDRYLLSLSFRSQGKTLHTRIEHSNGSFSFYEQP-DVEGH 431 rainbow trout
NP_955919    370 TAELKKLAKQGWYWGPITRWEAEEKLTNLPDGSFLVRDSSDDRYLLSLSFRSQTKTLHTRIEHSNGSFSFYEQP-DIEGH 448 zebrafish
NP_001120784 372 TEELKKLAKQGWYWGPITRWEAEGKLANVPDGSFLVRDSSDDRYLLSLSFRSHGKTLHTRIEHSNGRFSFYEQP-DVEGH 450 chicken
Feature 1                             
2VIF_A        94 TSIVDLIEHSIGDSENGAFCY 114 human
NP_001072006 322 DSVVDLIMDSVRDSQEAGIFC 342 Ciona intestinalis
NP_001086732 450 TSIVELIEHSIRDSENGAFCY 470 African clawed frog
AAH54619     449 VSIVDLIDNSVKDSENGAFCY 469 zebrafish
EFN74396     309 TSVAALINHSMNFSQSAVICY 329 Camponotus floridanus
NP_001096240 450 TSIVELIEHSIRDSENGAFCY 470 western clawed frog
NP_004223    452 TSIVDLIEHSIRDSENGAFCY 472 human
NP_001182102 432 ISIVELIECSIIDSESGAFCY 452 rainbow trout
NP_955919    449 VSIVDLIDNSVKDSENGAFCY 469 zebrafish
NP_001120784 451 TSIVDLIEHSIRDSENGAFCY 471 chicken

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