2ZZF,1NYQ,2ZTG,2E1B,3KEW


Conserved Protein Domain Family
tRNA_SAD

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smart00863: tRNA_SAD 
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Threonyl and Alanyl tRNA synthetase second additional domain
The catalytically active form of threonyl/alanyl tRNA synthetase is a dimer. Within the tRNA synthetase class II dimer, the bound tRNA interacts with both monomers making specific interactions with the catalytic domain, the C-terminal domain, and this SAD domain (the second additional domain). The second additional domain is comprised of a pair of perpendicularly orientated antiparallel beta sheets, of four and three strands, respectively, that surround a central alpha helix that forms the core of the domain.
Statistics
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PSSM-Id: 197931
Aligned: 473 rows
Threshold Bit Score: 38.1322
Created: 15-Jul-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2ZZF_A        704 IRVVKIEDWDVQACGGTHLPSTGLVGPIKILRTERIQDG-------VERI 746  Pyrococcus horikoshii
XP_001347941  457 TSVYRCGN-FIDLCLGPHIKNTGKVKtFKVLKNSSAYWLgqkendsLQRV 505  Plasmodium falciparum 3D7
NP_586084     168 SSVYRNGD-FFDMCLGPHIRSTGVIKaVKVLKNSSAYFLndpnlksLQRI 216  Encephalitozoon cuniculi GB-M1
XP_001705100  207 CSVYQCGD-FVDFCRGPHIPDLGLIQaFKCMYSSAAYFKgdqnresMQRV 255  Giardia lamblia ATCC 50803
YP_023372     201 ATVYREGD-YYEFCRGPHVPSTGFIKAFKLLSIASTTYNgeingkrMIRI 249  Picrophilus torridus DSM 9790
NP_111801     153 SSVYQQGN-FVDLCLGPHVPSTGYIKAFKLLSIASAVYKyde-sknLVRI 200  Thermoplasma volcanium GSS1
YP_326856     169 VSFYTQD-DWQDLCQGPHVDSTGEIGAVELLNIAAAYWRgdednetLTRV 217  Natronomonas pharaonis DSM 2160
YP_137844     199 VSFYTQG-EFEDLCQGPHVESTGEIGGFALLEISAAFWRgeeenetLTRV 247  Haloarcula marismortui ATCC 43049
NP_280563     179 VSFYTQG-DFEDLCKGPHVDSTGEIGGFEVLETSAAYWRgdeeretLTRV 227  Halobacterium sp. NRC-1
YP_505783     146 IIVYRCGS-HIFQNHSPLVPSTKYIgALKLTKLSGVYWLgdsknkmLQRI 194  Anaplasma phagocytophilum HZ
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