2IYB


Conserved Protein Domain Family
LIM3_Testin

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cd09419: LIM3_Testin 
Click on image for an interactive view with Cn3D
The third LIM domain of Testin
The third LIM domain of Testin: Testin contains three C-terminal LIM domains and a PET protein-protein interaction domain at the N-terminal. Testin is a cytoskeleton associated focal adhesion protein that localizes along actin stress fibers at cell-cell-contact areas and at focal adhesion plaques. Testin interacts with a variety of cytoskeletal proteins, including zyxin, mena, VASP, talin, and actin and it is involved in cell motility and adhesion events. Knockout mice experiments reveal that tumor repressor function of Testin. LIM domains are 50-60 amino acids in size and share two characteristic zinc finger motifs. The two zinc fingers contain eight conserved residues, mostly cysteines and histidines, which coordinately bond to two zinc atoms. LIM domains function as adaptors or scaffolds to support the assembly of multimeric protein complexes.
Statistics
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PSSM-Id: 188803
Aligned: 6 rows
Threshold Bit Score: 100.73
Created: 22-Jul-2010
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Zn binding site
Conserved site includes 8 residues -Click on image for an interactive view with Cn3D
Feature 1:Zn binding site [ion binding site]
Evidence:
  • Structure:2IYB_A: Human Testin protein LIM3 domain binds Zn
    View structure with Cn3D
  • Comment: The two zinc fingers contain eight conserved residues, mostly cysteines and histidines, which coordinately bond to two zinc atoms. The Zn binding residues of LIM domain are highly conserved.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1        #  #                  #    #  #  #                 #   #   
2IYB_E         5 CQGCHNAIDPEVQRVTYNNFSWHASTECFLCSCCSKCLIGQKFMPVEGMVFCSVECKKR 63  human
AAH75889     479 CVACQKPIEPESQRVSYGEHHWHAEPQCFQCAGCSKCLMGQRFMALQGKLICSVECKKK 537 zebrafish
AAL40362     651 CSSCKKPVDPEAQRVSYGDHHWHAEPQCFQCSGCSKCLIGQRFMAAQGFLFCSVECKKK 709 torafugu
NP_001080706 361 CQGCHNAIDPEVQRVSYNGFHWHAAPECFICSCCSKCLIGQKFMPIEGMVFCSVECKKK 419 African clawed frog
NP_989954    361 CQGCHNAIDPEVQRVTYNNFNWHATQECFLCSCCSKCLIGQKFMPVEGMVFCSVECKKK 419 chicken
BAE21619     351 CQGCHNAIDPEEQRVIYKIFSWHASTACFLCSCCSKCLIGEKFIPVEGMVFCSTQCKNM 409 house mouse

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