2XEV


Conserved Protein Domain Family
tol_pal_ybgF

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TIGR02795: tol_pal_ybgF 
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tol-pal system protein YbgF
Members of this protein family are the product of one of seven genes regularly clustered in operons to encode the proteins of the tol-pal system, which is critical for maintaining the integrity of the bacterial outer membrane. The gene for this periplasmic protein has been designated orf2 and ybgF. All members of the seed alignment were from unique tol-pal gene regions from completed bacterial genomes. The architecture of this protein is a signal sequence, a low-complexity region usually rich in Asn and Gln, a well-conserved region with tandem repeats that resemble the tetratricopeptide (TPR) repeat, involved in protein-protein interaction.
Statistics
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PSSM-Id: 188247
Aligned: 31 rows
Threshold Bit Score: 133.175
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2XEV_A                    3 RTAYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKL 82  Xant...
AAL44522                206 GDIYQAAYGHVLSGDYKLAEQGFQQYLQGYPKGTKAADASFWLGEAQYSQGKFNEAAKTFLNGHQTYGKSPKAPEMLMKL 285 Agro...
CAC47316                222 GDLYQAGYSHVLSGDYSIAEQEFRDYLDAFPSGDKAADASFWMGEAQYSQGKYSDAAKTFLNAHQSHGKSPKAPEMLLKL 301 Sino...
BAB50681                247 EELYRNSYQFILSGDYGTAEQGFRDHISRFPRDAKAADAHYWLGESLLGQQKYRDAAEVFLAASKDYPKAKKAPDMLLKL 326 Meso...
BAC52413                275 RDEFDLGIGYMQRKDYALAEQTMKNFAQKYPSDPLLGDAQYWLGESYFQRQQYRDSAEAFLAVTTKYEKSAKAPDALLRL 354 Brad...
AAK25190                160 AVAFKQAKDLLLAGDYANAEQAFAAYVNNYPESARTPEARYWLGETQFVREAYTDAAGNYIGAIRGWPQTSWAPDATLKL 239 Caul...
gnl:microosu:SAR11_0599 196 EKQYEFATSFLKVGDYSTAERAFREFVINNSEHKLAGNAQYWYAETFRIRQLYTDAATAYLEGYQKYPKGEKAPINLLKL 275 Cand...
WP_012545231            145 KEIYDSAHVDIKEKRYASARDKFQEITKNYPDFELLPNSYFWIGETYYSEKKYEDAILAYEEFLKKYPKHDKAPGALLKE 224 Ther...
WP_011338401            152 KADFDRAQEVLGQGDFRTAADLFKTFAETYTGGQLTYEAHYLRGEALSRLGETANAARAYLESFSGDPDGPRAPEALLKL 231 Rhod...
WP_013068891            154 QADFDRAKGVLDQGDFRAAADLFKTFAETYPGGPLTGDAGYLRGEALMKAGDVPGAPRAWLDGFSAEPEGKRAADDLLEL 233 Rhod...
2XEV_A                   83 GLSQYGEGKNTEAQQTLQQVATQYPGSDAARVAQERL 119 Xanthomonas campestris
AAL44522                286 GMSLAALDNTETACATLREVPKRYPNASKTVLSKVAS 322 Agrobacterium tumefaciens str. C58
CAC47316                302 GMSLGALDNKETACATLREVNKRYSKASPAVKAKVAS 338 Sinorhizobium meliloti 1021
BAB50681                327 GVSLVGLKQHDVACATFSEVGKRYPDISSALKERVKQ 363 Mesorhizobium loti MAFF303099
BAC52413                355 GQSLAALKEKEAACAAFGEVGRKYPRASAGVKAAVDR 391 Bradyrhizobium diazoefficiens USDA 110
AAK25190                240 ARSMVALRKTTEACRTLDELAKRYPKAPAQVNSRAAS 276 Caulobacter crescentus CB15
gnl:microosu:SAR11_0599 276 GVSMVQIGEKEQGCKMIVGVEEQYPKANQSVLQKAKY 312 Candidatus Pelagibacter ubique HTCC1062
WP_012545231            225 GMAFLELKDKKTAKVVFERVIERYPKSKEAEIAQQKI 261 Thermodesulfovibrio
WP_011338401            232 GRALGDLRQTPEACVTLAEVGTRFPGSPSAAEAATTM 268 Rhodobacter sphaeroides
WP_013068891            234 GKALGTLGRKTEACATLTEVPARFPGSEARGKVAAAQ 270 Rhodobacter capsulatus
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