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Report for CCDS14678.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14678.1 Public Homo sapiens X MAGEC2 24 110 108 CCDS HistoryNCBI Gene:51438Re-query CCDS DB by CCDS ID:14678.1Re-query CCDS DB by GeneID:51438See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14678.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000247452.4 ENSP00000354660.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000247452.4Link to Ensembl Protein Viewer:ENSP00000354660.2Re-query CCDS DB by Nucleotide ID:ENST00000247452Re-query CCDS DB by Protein ID:ENSP00000354660
Original member Current member NCBI NM_016249.4 NP_057333.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_016249.4Link to Protein Sequence:NP_057333.1Re-query CCDS DB by Nucleotide ID:NM_016249Re-query CCDS DB by Protein ID:NP_057333Link to BLAST:NP_057333.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_057333.1 373 Q9UBF1 373 100% 0 0

Chromosomal Locations for CCDS 14678.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 142202866 142203987 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1122 nt):
ATGCCTCCCGTTCCAGGCGTTCCATTCCGCAACGTTGACAACGACTCCCCGACCTCAGTTGAGTTAGAAG
ACTGGGTAGATGCACAGCATCCCACAGATGAGGAAGAGGAGGAAGCCTCCTCCGCCTCTTCCACTTTGTA
CTTAGTATTTTCCCCCTCTTCTTTCTCCACATCCTCTTCTCTGATTCTTGGTGGTCCTGAGGAGGAGGAG
GTGCCCTCTGGTGTGATACCAAATCTTACCGAGAGCATTCCCAGTAGTCCTCCACAGGGTCCTCCACAGG
GTCCTTCCCAGAGTCCTCTGAGCTCCTGCTGCTCCTCTTTTTCATGGAGCTCATTCAGTGAGGAGTCCAG
CAGCCAGAAAGGGGAGGATACAGGCACCTGTCAGGGCCTGCCAGACAGTGAGTCCTCTTTCACATATACA
CTAGATGAAAAGGTGGCCGAGTTAGTGGAGTTCCTGCTCCTCAAATACGAAGCAGAGGAGCCTGTAACAG
AGGCAGAGATGCTGATGATTGTCATCAAGTACAAAGATTACTTTCCTGTGATACTCAAGAGAGCCCGTGA
GTTCATGGAGCTTCTTTTTGGCCTTGCCCTGATAGAAGTGGGCCCTGACCACTTCTGTGTGTTTGCAAAC
ACAGTAGGCCTCACCGATGAGGGTAGTGATGATGAGGGCATGCCCGAGAACAGCCTCCTGATTATTATTC
TGAGTGTGATCTTCATAAAGGGCAACTGTGCCTCTGAGGAGGTCATCTGGGAAGTGCTGAATGCAGTAGG
GGTATATGCTGGGAGGGAGCACTTCGTCTATGGGGAGCCTAGGGAGCTCCTCACTAAAGTTTGGGTGCAG
GGACATTACCTGGAGTATCGGGAGGTGCCCCACAGTTCTCCTCCATATTATGAATTCCTGTGGGGTCCGA
GAGCCCATTCAGAAAGCATCAAGAAGAAAGTACTAGAGTTTTTAGCCAAGCTGAACAACACTGTTCCTAG
TTCCTTTCCATCCTGGTACAAGGATGCTTTGAAAGATGTGGAAGAGAGAGTCCAGGCCACAATTGATACC
GCAGATGATGCCACTGTCATGGCCAGTGAAAGCCTCAGTGTCATGTCCAGCAACGTCTCCTTTTCTGAGT
GA

Translation (373 aa):
MPPVPGVPFRNVDNDSPTSVELEDWVDAQHPTDEEEEEASSASSTLYLVFSPSSFSTSSSLILGGPEEEE
VPSGVIPNLTESIPSSPPQGPPQGPSQSPLSSCCSSFSWSSFSEESSSQKGEDTGTCQGLPDSESSFTYT
LDEKVAELVEFLLLKYEAEEPVTEAEMLMIVIKYKDYFPVILKRAREFMELLFGLALIEVGPDHFCVFAN
TVGLTDEGSDDEGMPENSLLIIILSVIFIKGNCASEEVIWEVLNAVGVYAGREHFVYGEPRELLTKVWVQ
GHYLEYREVPHSSPPYYEFLWGPRAHSESIKKKVLEFLAKLNNTVPSSFPSWYKDALKDVEERVQATIDT
ADDATVMASESLSVMSSNVSFSE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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