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Report for CCDS24236.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
24236.1 Public Mus musculus 10 Ddit3 23 108 98 CCDS HistoryNCBI Gene:13198Re-query CCDS DB by CCDS ID:24236.1Re-query CCDS DB by GeneID:13198See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 24236.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000026475.14 ENSMUSP00000026475.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000026475.14Link to Ensembl Protein Viewer:ENSMUSP00000026475.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000026475Re-query CCDS DB by Protein ID:ENSMUSP00000026475
Original member NCBI NM_001290183.1 NP_001277112.1 Updated not alive Link to Nucleotide Sequence:NM_001290183.1Link to Protein Sequence:NP_001277112.1Re-query CCDS DB by Nucleotide ID:NM_001290183Re-query CCDS DB by Protein ID:NP_001277112
Current member NCBI NM_001290183.2 NP_001277112.1 Accepted alive Link to Nucleotide Sequence:NM_001290183.2Link to Protein Sequence:NP_001277112.1Re-query CCDS DB by Nucleotide ID:NM_001290183Re-query CCDS DB by Protein ID:NP_001277112Link to BLAST:NP_001277112.1
Original member NCBI NM_007837.4 NP_031863.3 Updated not alive Link to Nucleotide Sequence:NM_007837.4Link to Protein Sequence:NP_031863.3Re-query CCDS DB by Nucleotide ID:NM_007837Re-query CCDS DB by Protein ID:NP_031863
Current member NCBI NM_007837.5 NP_031863.3 Accepted alive Link to Nucleotide Sequence:NM_007837.5Link to Protein Sequence:NP_031863.3Re-query CCDS DB by Nucleotide ID:NM_007837Re-query CCDS DB by Protein ID:NP_031863Link to BLAST:NP_031863.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001277112.1 168 P35639-1 168 100% 0 0
NP_031863.3 168 P35639-1 168 100% 0 0

Chromosomal Locations for CCDS 24236.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 127295341 127295478 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 127295723 127296091 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (507 nt):
ATGGCAGCTGAGTCCCTGCCTTTCACCTTGGAGACGGTGTCCAGCTGGGAGCTGGAAGCCTGGTATGAGG
ATCTGCAGGAGGTCCTGTCCTCAGATGAAATTGGGGGCACCTATATCTCATCCCCAGGAAACGAAGAGGA
AGAATCAAAAACCTTCACTACTCTTGACCCTGCGTCCCTAGCTTGGCTGACAGAGGAGCCAGGGCCAACA
GAGGTCACACGCACATCCCAAAGCCCTCGCTCTCCAGATTCCAGTCAGAGTTCTATGGCCCAGGAGGAAG
AGGAGGAAGAGCAAGGAAGAACTAGGAAACGGAAACAGAGTGGTCAGTGCCCAGCCCGGCCTGGGAAGCA
ACGCATGAAGGAGAAGGAGCAGGAGAACGAGCGGAAAGTGGCACAGCTAGCTGAAGAGAACGAGCGGCTC
AAGCAGGAAATCGAGCGCCTGACCAGGGAGGTGGAGACCACACGGCGGGCTCTGATCGACCGCATGGTCA
GCCTGCACCAAGCATGA

Translation (168 aa):
MAAESLPFTLETVSSWELEAWYEDLQEVLSSDEIGGTYISSPGNEEEESKTFTTLDPASLAWLTEEPGPT
EVTRTSQSPRSPDSSQSSMAQEEEEEEQGRTRKRKQSGQCPARPGKQRMKEKEQENERKVAQLAEENERL
KQEIERLTREVETTRRALIDRMVSLHQA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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