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Report for CCDS731.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
731.1 Public Homo sapiens 1 ZNF644 24 110 108 CCDS HistoryNCBI Gene:84146Re-query CCDS DB by CCDS ID:731.1Re-query CCDS DB by GeneID:84146See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 731.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000337393.10 ENSP00000337008.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000337393.10Link to Ensembl Protein Viewer:ENSP00000337008.5Re-query CCDS DB by Nucleotide ID:ENST00000337393Re-query CCDS DB by Protein ID:ENSP00000337008
Original member Current member EBI ENST00000370440.5 ENSP00000359469.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000370440.5Link to Ensembl Protein Viewer:ENSP00000359469.1Re-query CCDS DB by Nucleotide ID:ENST00000370440Re-query CCDS DB by Protein ID:ENSP00000359469
Original member Current member NCBI NM_201269.3 NP_958357.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_201269.3Link to Protein Sequence:NP_958357.1Re-query CCDS DB by Nucleotide ID:NM_201269Re-query CCDS DB by Protein ID:NP_958357Link to BLAST:NP_958357.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_958357.1 1327 Q9H582-1 1327 100% 0 0

Chromosomal Locations for CCDS 731.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 90916798 90916990 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 90918052 90918154 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 90937485 90938090 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 90938272 90941309 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 90982310 90982353 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3984 nt):
ATGAGATCGTTCTTGCAGCAAGATGTTAATAAGACAAAATCTAGACTAAATGTGTTAAATGGGCTTGCCA
ACAATATGGATGATTTGAAGATAAACACCGATATTACTGGTGCTAAAGAAGAACTCCTAGATGACAACAA
TTTTATCTCAGACAAAGAGAGCGGAGTTCATAAGCCAAAAGATTGTCAAACATCATTTCAGAAAAATAAT
ACGTTGACTCTGCCTGAAGAACTGTCAAAGGACAAATCTGAAAACGCCTTAAGTGGAGGCCAGTCTAGTC
TATTTATACATGCTGGTGCTCCTACTGTTTCTAGTGAAAACTTTATCTTGCCTAAAGGAGCTGCTGTTAA
TGGACCAGTTTCACACTCCTCCTTAACTAAGACTTCCAATATGAATAAAGGCAGTGTTTCATTAACCACT
GGACAGCCTGTGGATCAGCCAACAACAGAATCTTGTTCAACTTTGAAGGTAGCAGCTGATCTTCAGCTGT
CTACACCACAGAAAGCAAGTCAACACCAAGTTTTATTTTTGTTATCAGATGTAGCACATGCTAAGAATCC
CACCCATTCCAATAAAAAACTACCTACCTCTGCTTCAGTTGGTTGTGACATTCAGAATTCAGTAGGGAGT
AATATAAAGTCAGATGGCACTTTAATAAATCAAGTAGAGGTGGGTGAGGATGGTGAAGATTTATTGGTGA
AAGATGATTGTGTCAATACAGTAACGGGAATTTCCTCAGGTACAGATGGATTTAGGTCAGAAAATGATAC
AAACTGGGATCCCCAAAAAGAGTTCATTCAATTTCTTATGACTAATGAGGAAACAGTAGATAAAGCTCCA
CCTCATTCTAAAATAGGTCTAGAAAAAAAAAGAAAGCGAAAAATGGATGTAAGCAAGATAACTCGTTATA
CCGAGGATTGCTTTAGTGATTCTAATTGTGTACCCAATAAATCAAAAATGCAAGAAGTAGACTTTCTAGA
ACAAAATGAAGAGCTACAAGCAGTAGACTCACAGAAATATGCATTATCAAAAGTGAAGCCTGAATCAACT
GATGAAGACTTAGAATCTGTGGATGCCTTCCAACATCTAATTTATAACCCAGATAAGTGTGGAGAAGAGA
GTTCACCTGTTCATACTAGCACTTTTCTTTCAAATACCTTAAAAAAGAAATGTGAAGAGAGTGATTCTGA
GTCACCTGCTACTTTCAGTACCGAAGAGCCATCATTCTACCCCTGTACAAAGTGCAATGTGAATTTTAGG
GAGAAGAAGCACCTCCACAGGCATATGATGTATCATTTAGATGGGAATAGTCACTTTCGCCATCTTAATG
TCCCAAGGCCATATGCTTGTAGAGAATGTGGACGGACATTTCGAGATCGCAATTCACTTCTAAAACATAT
GATTATTCACCAGGAGAGAAGACAGAAGTTGATGGAGGAAATTCGTGAATTGAAAGAACTTCAGGATGAA
GGAAGAAGTGCACGATTACAGTGTCCTCAGTGTGTGTTTGGTACCAATTGCCCTAAAACATTTGTGCAAC
ATGCTAAAACCCATGAAAAAGATAAAAGGTACTACTGCTGTGAAGAGTGTAACTTCATGGCAGTGACAGA
AAATGAATTGGAATGCCATCGAGGCATTGCACATGGGGCAGTGGTAAAATGCCCTATGGTCACTTCTGAT
ATTGCCCAGAGAAAAACACAAAAAAAGACTTTCATGAAAGACTCTGTAGTAGGATCATCCAAAAAATCAG
CTACCTACATATGTAAGATGTGTCCTTTTACTACTTCAGCCAAAAGTGTTTTAAAAAAGCACACGGAGTA
CTTGCATTCATCATCATGTGTTGATTCATTTGGTAGTCCTCTTGGACTTGATAAAAGAAAAAATGACATC
CTTGAAGAACCTGTAGATAGTGATAGCACTAAAACATTAACTAAACAACAGTCAACCACATTTCCAAAGA
ACTCTGCTTTAAAACAAGATGTGAAGCGAACATTTGGATCAACCTCACAATCAAGTAGTTTTTCAAAAAT
TCATAAGCGGCCACACAGAATACAGAAAGCTCGGAAAAGCATTGCCCAATCAGGTGTAAACATGTGCAAT
CAAAACAGCTCTCCTCATAAGAATGTTACAATTAAAAGCAGCGTTGACCAAAAACCTAAGTATTTCCATC
AAGCAGCAAAAGAAAAGTCTAATGCCAAGGCAAATAGCCACTATTTGTATAGACACAAATATGAAAACTA
TAGGATGATCAAAAAATCAGGTGAATCATATCCTGTGCATTTCAAAAAAGAAGAAGCTAGTTCATTAAAT
TCTTTACACCTGTTTTCATCATCAAGTAATTCTCACAACAATTTTATTTCAGACCCTCATAAGCCTGACG
CCAAAAGGCCTGAAAGCTTCAAAGATCACAGACGTGTAGCTGTAAAGAGAGTAATTAAGGAATCTAAGAA
GGAAAGTTCTGTTGGAGGGGAAGACTTGGATAGCTATCCAGATTTTTTGCATAAAATGACTGTTGTCGTT
TTGCAAAAACTTAATTCTGCTGAAAAGAAAGATAGTTATGAAACAGAAGATGAAAGTTCCTGGGATAATG
TTGAGTTAGGAGACTACACTACACAGGCCATAGAAGATGAAACCTATAGTGATATTAATCAAGAGCATGT
AAATTTATTCCCTTTATTTAAGAGCAAAGTGGAAGGTCAGGAGCCTGGAGAAAATGCTACTCTTAGTTAT
GACCAAAACGATGGCTTTTATTTTGAATACTATGAAGATACTGGAAGTAACAACTTTTTGCATGAGATAC
ATGATCCTCAGCATTTAGAAACTGCAGATGCTTCATTGTCAAAGCATAGTTCTGTTTTTCATTGGACTGA
TTTGTCTCTTGAGAAGAAATCGTGTCCTTACTGCCCAGCAACATTTGAAACAGGTGTTGGGTTATCAAAT
CATGTCAGGGGGCATCTTCACAGAGCAGGATTAAGCTATGAAGCCCGTCATGTTGTATCACCAGAACAAA
TAGCCACAAGTGACAAAATGCAGCATTTCAAAAGAACTGGCACAGGAACACCTGTTAAACGAGTTAGAAA
AGCTATAGAGAAGTCTGAAACCACTTCTGAACACACTTGTCAGCTCTGTGGTGGTTGGTTTGATACTAAA
ATTGGATTATCAAATCATGTTAGAGGCCACTTGAAAAGACTTGGAAAGACGAAATGGGATGCTCACAAAT
CTCCAATCTGTGTTCTGAATGAGATGATGCAAAATGAAGAAAAATATGAAAAAATCTTAAAGGCATTGAA
CAGTCGTCGTATTATTCCCAGACCATTTGTAGCTCAAAAACTTGCATCAAGTGATGACTTTATATCTCAA
AATGTTATACCTCTTGAAGCATACCGTAATGGCCTAAAGACTGAAGCTCTGTCAGTGTCTGCATCAGAAG
AAGAAGGGCTGAATTTCTTAAATGAATATGATGAAACAAAACCAGAACTGCCCAGTGGGAAAAAGAATCA
GTCTCTTACACTCATAGAACTTCTTAAAAATAAAAGGATGGGAGAAGAAAGGAATTCTGCTATTTCTCCT
CAAAAGATCCATAATCAGACAGCAAGAAAGAGATTCGTTCAGAAATGCGTTCTTCCATTAAATGAGGATA
GTCCGTTGATGTATCAGCCACAAAAAATGGACTTGACTATGCACTCAGCCTTAGATTGTAAGCAAAAGAA
ATCAAGGTCAAGATCTGGAAGCAAGAAGAAAATGCTAACATTACCTCATGGTGCTGACGAGGTTTACATT
CTCCGATGCAGGTTTTGTGGCCTAGTCTTTCGAGGACCCTTGTCTGTTCAGGAAGACTGGATTAAGCACT
TACAACGACATATTGTAAACGCTAATCTTCCACGGACTGGAGCTGGCATGGTGGAAGTCACGTCACTACT
TAAAAAGCCTGCCTCCATTACAGAAACTTCATTTTCTCTACTAATGGCCGAAGCAGCTTCATAG

Translation (1327 aa):
MRSFLQQDVNKTKSRLNVLNGLANNMDDLKINTDITGAKEELLDDNNFISDKESGVHKPKDCQTSFQKNN
TLTLPEELSKDKSENALSGGQSSLFIHAGAPTVSSENFILPKGAAVNGPVSHSSLTKTSNMNKGSVSLTT
GQPVDQPTTESCSTLKVAADLQLSTPQKASQHQVLFLLSDVAHAKNPTHSNKKLPTSASVGCDIQNSVGS
NIKSDGTLINQVEVGEDGEDLLVKDDCVNTVTGISSGTDGFRSENDTNWDPQKEFIQFLMTNEETVDKAP
PHSKIGLEKKRKRKMDVSKITRYTEDCFSDSNCVPNKSKMQEVDFLEQNEELQAVDSQKYALSKVKPEST
DEDLESVDAFQHLIYNPDKCGEESSPVHTSTFLSNTLKKKCEESDSESPATFSTEEPSFYPCTKCNVNFR
EKKHLHRHMMYHLDGNSHFRHLNVPRPYACRECGRTFRDRNSLLKHMIIHQERRQKLMEEIRELKELQDE
GRSARLQCPQCVFGTNCPKTFVQHAKTHEKDKRYYCCEECNFMAVTENELECHRGIAHGAVVKCPMVTSD
IAQRKTQKKTFMKDSVVGSSKKSATYICKMCPFTTSAKSVLKKHTEYLHSSSCVDSFGSPLGLDKRKNDI
LEEPVDSDSTKTLTKQQSTTFPKNSALKQDVKRTFGSTSQSSSFSKIHKRPHRIQKARKSIAQSGVNMCN
QNSSPHKNVTIKSSVDQKPKYFHQAAKEKSNAKANSHYLYRHKYENYRMIKKSGESYPVHFKKEEASSLN
SLHLFSSSSNSHNNFISDPHKPDAKRPESFKDHRRVAVKRVIKESKKESSVGGEDLDSYPDFLHKMTVVV
LQKLNSAEKKDSYETEDESSWDNVELGDYTTQAIEDETYSDINQEHVNLFPLFKSKVEGQEPGENATLSY
DQNDGFYFEYYEDTGSNNFLHEIHDPQHLETADASLSKHSSVFHWTDLSLEKKSCPYCPATFETGVGLSN
HVRGHLHRAGLSYEARHVVSPEQIATSDKMQHFKRTGTGTPVKRVRKAIEKSETTSEHTCQLCGGWFDTK
IGLSNHVRGHLKRLGKTKWDAHKSPICVLNEMMQNEEKYEKILKALNSRRIIPRPFVAQKLASSDDFISQ
NVIPLEAYRNGLKTEALSVSASEEEGLNFLNEYDETKPELPSGKKNQSLTLIELLKNKRMGEERNSAISP
QKIHNQTARKRFVQKCVLPLNEDSPLMYQPQKMDLTMHSALDCKQKKSRSRSGSKKKMLTLPHGADEVYI
LRCRFCGLVFRGPLSVQEDWIKHLQRHIVNANLPRTGAGMVEVTSLLKKPASITETSFSLLMAEAAS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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