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Report for CCDS3553.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
3553.1 Public Homo sapiens 4 ADAMTS3 24 110 108 CCDS HistoryNCBI Gene:9508Re-query CCDS DB by CCDS ID:3553.1Re-query CCDS DB by GeneID:9508See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 3553.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000286657.10 ENSP00000286657.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000286657.10Link to Ensembl Protein Viewer:ENSP00000286657.4Re-query CCDS DB by Nucleotide ID:ENST00000286657Re-query CCDS DB by Protein ID:ENSP00000286657
Original member Current member EBI ENST00000622135.1 ENSP00000480055.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000622135.1Link to Ensembl Protein Viewer:ENSP00000480055.1Re-query CCDS DB by Nucleotide ID:ENST00000622135Re-query CCDS DB by Protein ID:ENSP00000480055
Original member Current member NCBI NM_014243.3 NP_055058.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014243.3Link to Protein Sequence:NP_055058.2Re-query CCDS DB by Nucleotide ID:NM_014243Re-query CCDS DB by Protein ID:NP_055058Link to BLAST:NP_055058.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055058.2 1205 O15072 1205 100% 0 0

Chromosomal Locations for CCDS 3553.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 72283136 72283704 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 72288751 72288868 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 72290855 72291062 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 72295654 72295786 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 72298277 72298442 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 72303917 72304080 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 72305987 72306067 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 72309397 72309520 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 72311048 72311181 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 72312291 72312466 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 72313677 72313822 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 72315858 72315971 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 72318572 72318704 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 72319332 72319475 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 72319858 72319963 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 72320714 72320870 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 72323014 72323097 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 72339494 72339693 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 72414815 72414971 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 72548478 72548884 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 72567374 72567401 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 72568694 72568762 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3618 nt):
ATGGTTCTCCTGTCACTTTGGTTGATAGCAGCCGCTCTGGTAGAGGTTAGGACTTCAGCTGATGGACAAG
CTGGTAATGAAGAAATGGTGCAAATAGATTTACCAATAAAGAGATATAGAGAGTATGAGCTGGTGACTCC
AGTCAGCACAAATCTAGAAGGACGCTATCTCTCCCATACTCTTTCTGCGAGTCACAAAAAGAGGTCAGCG
AGGGACGTGTCTTCCAACCCTGAGCAGTTGTTCTTTAACATCACGGCATTTGGAAAAGATTTTCATCTGC
GACTAAAGCCCAACACTCAACTAGTAGCTCCTGGGGCTGTTGTGGAGTGGCATGAGACATCTCTGGTGCC
TGGGAATATAACCGATCCCATTAACAACCATCAACCAGGAAGTGCTACGTATAGAATCCGGAGAACAGAG
CCTTTGCAGACTAACTGTGCTTATGTTGGTGACATCGTGGACATTCCAGGAACCTCTGTTGCCATCAGCA
ACTGTGATGGTCTGGCTGGAATGATAAAAAGTGATAATGAAGAGTATTTCATTGAACCCTTGGAAAGAGG
TAAACAGATGGAGGAAGAAAAAGGAAGGATTCATGTTGTCTACAAGAGATCAGCTGTAGAACAGGCTCCC
ATAGACATGTCCAAAGACTTCCACTACAGAGAGTCGGACCTGGAAGGCCTTGATGATCTAGGTACTGTTT
ATGGCAACATCCACCAGCAGCTGAATGAAACAATGAGACGCCGCAGACACGCGGGAGAAAACGATTACAA
TATCGAGGTACTGCTGGGAGTGGATGACTCTGTGGTCCGTTTCCATGGCAAAGAGCACGTCCAAAACTAC
CTCCTGACCCTAATGAACATTGTGAATGAAATTTACCATGATGAGTCCCTCGGAGTGCATATAAATGTGG
TCCTGGTGCGCATGATAATGCTGGGATATGCAAAGTCCATCAGCCTCATAGAAAGGGGAAACCCATCCAG
AAGCTTGGAGAATGTGTGTCGCTGGGCGTCCCAACAGCAAAGATCTGATCTCAACCACTCTGAACACCAT
GACCATGCAATTTTTTTAACCAGGCAAGACTTTGGACCTGCTGGAATGCAAGGATATGCTCCAGTCACCG
GCATGTGTCATCCAGTGAGAAGTTGTACCCTGAATCATGAGGATGGTTTTTCATCTGCTTTTGTAGTAGC
CCATGAAACGGGCCATGTGTTGGGAATGGAGCATGATGGACAAGGCAACAGGTGTGGTGATGAGACTGCT
ATGGGAAGTGTCATGGCTCCCTTGGTACAAGCAGCATTCCATCGTTACCACTGGTCCCGATGCAGTGGTC
AAGAACTGAAAAGATATATCCATTCCTATGACTGTCTCCTTGATGACCCTTTTGATCATGATTGGCCTAA
ACTCCCAGAACTTCCTGGAATCAATTATTCTATGGATGAGCAATGTCGTTTTGATTTTGGTGTTGGCTAT
AAAATGTGCACCGCGTTCCGAACCTTTGACCCATGTAAACAGCTGTGGTGTAGCCATCCTGATAATCCCT
ACTTTTGTAAGACTAAAAAGGGACCTCCACTTGATGGGACTGAATGTGCTGCTGGAAAATGGTGCTATAA
GGGTCATTGCATGTGGAAGAATGCTAATCAGCAAAAACAAGATGGCAATTGGGGGTCATGGACTAAATTT
GGCTCCTGTTCTCGGACATGTGGAACTGGTGTTCGTTTCAGAACACGCCAGTGCAATAATCCCATGCCCA
TCAATGGTGGTCAGGATTGTCCTGGTGTTAATTTTGAGTACCAGCTTTGTAACACAGAAGAATGCCAAAA
ACACTTTGAGGACTTCAGAGCACAGCAGTGTCAGCAGCGAAACTCCCACTTTGAATACCAGAATACCAAA
CACCACTGGTTGCCATATGAACATCCTGACCCCAAGAAAAGATGCCACCTTTACTGTCAGTCCAAGGAGA
CTGGAGATGTTGCTTACATGAAACAACTGGTGCATGATGGAACGCACTGTTCTTACAAAGATCCATATAG
CATATGTGTGCGAGGAGAGTGTGTGAAAGTGGGCTGTGATAAAGAAATTGGTTCTAATAAGGTTGAGGAT
AAGTGTGGTGTCTGTGGAGGAGATAATTCCCACTGCCGAACCGTGAAGGGGACATTTACCAGAACTCCCA
GGAAGCTTGGGTACCTTAAGATGTTTGATATACCCCCTGGGGCTAGACATGTGTTAATCCAAGAAGACGA
GGCTTCTCCTCATATTCTTGCTATTAAGAACCAGGCTACAGGCCATTATATTTTAAATGGCAAAGGGGAG
GAAGCCAAGTCGCGGACCTTCATAGATCTTGGTGTGGAGTGGGATTATAACATTGAAGATGACATTGAAA
GTCTTCACACCGATGGACCTTTACATGATCCTGTTATTGTTTTGATTATACCTCAAGAAAATGATACCCG
CTCTAGCCTGACATATAAGTACATCATCCATGAAGACTCTGTACCTACAATCAACAGCAACAATGTCATC
CAGGAAGAATTAGATACTTTTGAGTGGGCTTTGAAGAGCTGGTCTCAGTGTTCCAAACCCTGTGGTGGAG
GTTTCCAGTACACTAAATATGGATGCCGTAGGAAAAGTGATAATAAAATGGTCCATCGCAGCTTCTGTGA
GGCCAACAAAAAGCCGAAACCTATTAGACGAATGTGCAATATTCAAGAGTGTACACATCCACTCTGGGTA
GCAGAAGAATGGGAACACTGCACCAAAACCTGTGGAAGTTCTGGCTATCAGCTTCGCACTGTACGCTGCC
TTCAGCCACTCCTTGATGGCACCAACCGCTCTGTGCACAGCAAATACTGCATGGGTGACCGTCCCGAGAG
CCGCCGGCCCTGTAACAGAGTGCCCTGCCCTGCACAGTGGAAAACAGGACCCTGGAGTGAGTGTTCAGTG
ACCTGCGGTGAAGGAACGGAGGTGAGGCAGGTCCTCTGCAGGGCTGGGGACCACTGTGATGGTGAAAAGC
CTGAGTCGGTCAGAGCCTGTCAACTGCCTCCTTGTAATGATGAACCATGTTTGGGAGACAAGTCCATATT
CTGTCAAATGGAAGTGTTGGCACGATACTGCTCCATACCAGGTTATAACAAGTTATGTTGTGAGTCCTGC
AGCAAGCGCAGTAGCACCCTGCCACCACCATACCTTCTAGAAGCTGCTGAAACTCATGATGATGTCATCT
CTAACCCTAGTGACCTCCCTAGATCTCTAGTGATGCCTACATCTTTGGTTCCTTATCATTCAGAGACCCC
TGCAAAGAAGATGTCTTTGAGTAGCATCTCTTCAGTGGGAGGTCCAAATGCATATGCTGCTTTCAGGCCA
AACAGTAAACCTGATGGTGCTAATTTACGCCAGAGGAGTGCTCAGCAAGCAGGAAGTAAGACTGTGAGAC
TGGTCACCGTACCATCCTCCCCACCCACCAAGAGGGTCCACCTCAGTTCAGCTTCACAAATGGCTGCTGC
TTCCTTCTTTGCAGCCAGTGATTCAATAGGTGCTTCTTCTCAGGCAAGAACCTCAAAGAAAGATGGAAAG
ATCATTGACAACAGACGTCCGACAAGATCATCCACCTTAGAAAGATGA

Translation (1205 aa):
MVLLSLWLIAAALVEVRTSADGQAGNEEMVQIDLPIKRYREYELVTPVSTNLEGRYLSHTLSASHKKRSA
RDVSSNPEQLFFNITAFGKDFHLRLKPNTQLVAPGAVVEWHETSLVPGNITDPINNHQPGSATYRIRRTE
PLQTNCAYVGDIVDIPGTSVAISNCDGLAGMIKSDNEEYFIEPLERGKQMEEEKGRIHVVYKRSAVEQAP
IDMSKDFHYRESDLEGLDDLGTVYGNIHQQLNETMRRRRHAGENDYNIEVLLGVDDSVVRFHGKEHVQNY
LLTLMNIVNEIYHDESLGVHINVVLVRMIMLGYAKSISLIERGNPSRSLENVCRWASQQQRSDLNHSEHH
DHAIFLTRQDFGPAGMQGYAPVTGMCHPVRSCTLNHEDGFSSAFVVAHETGHVLGMEHDGQGNRCGDETA
MGSVMAPLVQAAFHRYHWSRCSGQELKRYIHSYDCLLDDPFDHDWPKLPELPGINYSMDEQCRFDFGVGY
KMCTAFRTFDPCKQLWCSHPDNPYFCKTKKGPPLDGTECAAGKWCYKGHCMWKNANQQKQDGNWGSWTKF
GSCSRTCGTGVRFRTRQCNNPMPINGGQDCPGVNFEYQLCNTEECQKHFEDFRAQQCQQRNSHFEYQNTK
HHWLPYEHPDPKKRCHLYCQSKETGDVAYMKQLVHDGTHCSYKDPYSICVRGECVKVGCDKEIGSNKVED
KCGVCGGDNSHCRTVKGTFTRTPRKLGYLKMFDIPPGARHVLIQEDEASPHILAIKNQATGHYILNGKGE
EAKSRTFIDLGVEWDYNIEDDIESLHTDGPLHDPVIVLIIPQENDTRSSLTYKYIIHEDSVPTINSNNVI
QEELDTFEWALKSWSQCSKPCGGGFQYTKYGCRRKSDNKMVHRSFCEANKKPKPIRRMCNIQECTHPLWV
AEEWEHCTKTCGSSGYQLRTVRCLQPLLDGTNRSVHSKYCMGDRPESRRPCNRVPCPAQWKTGPWSECSV
TCGEGTEVRQVLCRAGDHCDGEKPESVRACQLPPCNDEPCLGDKSIFCQMEVLARYCSIPGYNKLCCESC
SKRSSTLPPPYLLEAAETHDDVISNPSDLPRSLVMPTSLVPYHSETPAKKMSLSSISSVGGPNAYAAFRP
NSKPDGANLRQRSAQQAGSKTVRLVTVPSSPPTKRVHLSSASQMAAASFFAASDSIGASSQARTSKKDGK
IIDNRRPTRSSTLER


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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