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Report for CCDS83222.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
83222.1 Public Homo sapiens 7 SPMIP1 24 110 108 CCDS HistoryNCBI Gene:100130705Re-query CCDS DB by CCDS ID:83222.1Re-query CCDS DB by GeneID:100130705See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 83222.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000609480.4 ENSP00000490280.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000609480.4Link to Ensembl Protein Viewer:ENSP00000490280.1Re-query CCDS DB by Nucleotide ID:ENST00000609480Re-query CCDS DB by Protein ID:ENSP00000490280
Original member Current member NCBI NM_001195150.3 NP_001182079.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001195150.3Link to Protein Sequence:NP_001182079.1Re-query CCDS DB by Nucleotide ID:NM_001195150Re-query CCDS DB by Protein ID:NP_001182079Link to BLAST:NP_001182079.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001182079.1 176 A0A1B0GUX0 176 100% 0 0

Chromosomal Locations for CCDS 83222.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 128866410 128866830 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 128868666 128868775 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (531 nt):
ATGTCACGGCAGCTCAACATAGACGCGTTACGGCAGAACTTCTGGAAGGAGGAATATCTGAGGGAAAAGA
TGTTGCGCTGTGAATGGTACCGCAAGTATGGGTCGATGGTGAAGGCCAAGCAGAAGGCTAAGGCTGCAGC
CCGCCTGCCCCTCAAACTGCCCACCCTGCACCCCAAAGCCCCACTCTCACCCCCACCCGCCCCCAAGTCA
GCCCCTTCCAAGGTGCCCAGCCCTGTCCCAGAGGCGCCTTTTCAGTCGGAAATGTACCCGGTACCACCTA
TCACCCGAGCCCTGCTGTATGAAGGCATCTCCCACGACTTCCAGGGGCGGTACCGCTACCTCAACACTCG
AAAACTGGACATGCCAGAGACGCGATACCTCTTCCCCATCACCACCAGCTTCACGTATGGCTGGCAGCTG
GGCCCCCCAGTGAAGCAAGAACTGGTCTCCTGCAAGATGTGCCGCATTGAGTCATTCTTCCGCAAGAACG
GGGCCTTCGCACTGCTTGATCCCCGAGACCTGGCCCTCTGA

Translation (176 aa):
MSRQLNIDALRQNFWKEEYLREKMLRCEWYRKYGSMVKAKQKAKAAARLPLKLPTLHPKAPLSPPPAPKS
APSKVPSPVPEAPFQSEMYPVPPITRALLYEGISHDFQGRYRYLNTRKLDMPETRYLFPITTSFTYGWQL
GPPVKQELVSCKMCRIESFFRKNGAFALLDPRDLAL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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